Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG1042
(417 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g21750.2 68414.m02723 protein disulfide isomerase, putative s... 65 2e-11
At1g21750.1 68414.m02722 protein disulfide isomerase, putative s... 65 2e-11
At1g77510.1 68414.m09026 protein disulfide isomerase, putative s... 50 8e-07
At3g22360.1 68416.m02823 alternative oxidase 1b, mitochondrial (... 32 0.14
At3g27620.1 68416.m03450 alternative oxidase 1c, mitochondrial (... 31 0.41
At2g42070.1 68415.m05202 MutT/nudix family protein similar to SP... 29 1.7
At4g37160.1 68417.m05261 multi-copper oxidase type I family prot... 28 2.9
At1g72890.1 68414.m08431 disease resistance protein (TIR-NBS cla... 27 3.8
At4g18640.1 68417.m02759 leucine-rich repeat transmembrane prote... 27 5.1
At3g28980.1 68416.m03622 expressed protein 27 5.1
At1g61970.1 68414.m06990 mitochondrial transcription termination... 27 5.1
At1g54130.1 68414.m06171 RelA/SpoT protein, putative (RSH3) iden... 27 5.1
At2g33740.2 68415.m04137 copper-binding protein (CUTA) identical... 27 6.7
At2g33740.1 68415.m04136 copper-binding protein (CUTA) identical... 27 6.7
At2g20720.1 68415.m02433 pentatricopeptide (PPR) repeat-containi... 27 6.7
At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a '... 27 6.7
At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a '... 27 6.7
At3g17520.1 68416.m02238 late embryogenesis abundant domain-cont... 26 8.9
At1g62085.1 68414.m07006 mitochondrial transcription termination... 26 8.9
>At1g21750.2 68414.m02723 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 487
Score = 64.9 bits (151), Expect = 2e-11
Identities = 50/137 (36%), Positives = 75/137 (54%), Gaps = 5/137 (3%)
Frame = +2
Query: 14 ARGHVKYMRAQVGPSSKELLTVADFEAFTSKDEVVVVGFFEKESDLK-GEFLKTADKLRE 190
A G V Y++ Q GP+S E+ + D S +VVVVG F K S + F+ A+KLR
Sbjct: 129 AEGIVTYLKKQSGPASAEIKSADDASEVVSDKKVVVVGIFPKLSGSEFDSFMAIAEKLRS 188
Query: 191 EVTFAHSSANEVLEK--TGYKNNVV-LYRPKRLQNKFEDSSVAFDGDTEKVSLKAFIKEN 361
E+ FAH+S ++L + + VV L++P +F DS FDG+ +L+ F+KE+
Sbjct: 189 ELDFAHTSDAKLLPRGESSVTGPVVRLFKP--FDEQFVDSK-DFDGE----ALEKFVKES 241
Query: 362 YHGLVGVRQKD-NIHDF 409
L+ V KD N H +
Sbjct: 242 SIPLITVFDKDPNNHPY 258
>At1g21750.1 68414.m02722 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 501
Score = 64.9 bits (151), Expect = 2e-11
Identities = 50/137 (36%), Positives = 75/137 (54%), Gaps = 5/137 (3%)
Frame = +2
Query: 14 ARGHVKYMRAQVGPSSKELLTVADFEAFTSKDEVVVVGFFEKESDLK-GEFLKTADKLRE 190
A G V Y++ Q GP+S E+ + D S +VVVVG F K S + F+ A+KLR
Sbjct: 129 AEGIVTYLKKQSGPASAEIKSADDASEVVSDKKVVVVGIFPKLSGSEFDSFMAIAEKLRS 188
Query: 191 EVTFAHSSANEVLEK--TGYKNNVV-LYRPKRLQNKFEDSSVAFDGDTEKVSLKAFIKEN 361
E+ FAH+S ++L + + VV L++P +F DS FDG+ +L+ F+KE+
Sbjct: 189 ELDFAHTSDAKLLPRGESSVTGPVVRLFKP--FDEQFVDSK-DFDGE----ALEKFVKES 241
Query: 362 YHGLVGVRQKD-NIHDF 409
L+ V KD N H +
Sbjct: 242 SIPLITVFDKDPNNHPY 258
>At1g77510.1 68414.m09026 protein disulfide isomerase, putative
similar to protein disulfide isomerase precursor
GB:P29828 GI:4704766 [Medicago sativa]; Pfam HMM hit:
PF00085 Thioredoxins
Length = 508
Score = 49.6 bits (113), Expect = 8e-07
Identities = 42/134 (31%), Positives = 62/134 (46%), Gaps = 2/134 (1%)
Frame = +2
Query: 14 ARGHVKYMRAQVGPSSKELLTVADFEAFTSKDEVVVVGFFEKES-DLKGEFLKTADKLRE 190
A G V Y++ Q GP+S E+ + + VV VG F K S D F+ A+KLR
Sbjct: 128 AEGIVTYLKKQSGPASVEIKSADSATEVVGEKNVVAVGVFPKLSGDEFDSFMALAEKLRA 187
Query: 191 EVTFAHSSANEVLEKTGYKNNVVLYRPKRLQNKFEDSSVAFDGDTEKVSLKAFIKENYHG 370
+ FAH+ + L + + K F DS F+G+ +L+ F+KE+
Sbjct: 188 DYDFAHTLDAKFLPRGESVEGPAVRLFKPFDELFVDSK-DFNGE----ALEKFVKESSIP 242
Query: 371 LVGVRQKD-NIHDF 409
LV V D N H +
Sbjct: 243 LVTVFDSDPNNHPY 256
>At3g22360.1 68416.m02823 alternative oxidase 1b, mitochondrial
(AOX1B) identical to GB:O23913 [SP|O23913] from
[Arabidopsis thaliana]
Length = 325
Score = 32.3 bits (70), Expect = 0.14
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Frame = +3
Query: 213 QPMKFLKKPDTKTMWSCIVP-----SDSRTSLKTHLLPSTETPRKCHSKLSSRR 359
+PMK K+ T+ WSC P SD LK H +PST + + + S R
Sbjct: 82 KPMKITKEDGTEWKWSCFRPWETYKSDLTIDLKKHHVPSTLPDKLAYWTVKSLR 135
>At3g27620.1 68416.m03450 alternative oxidase 1c, mitochondrial
(AOX1C) identical to alternative oxidase 1c precursor
GB:O22048 [SP|O22048] from [Arabidopsis thaliana]
Length = 329
Score = 30.7 bits (66), Expect = 0.41
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
Frame = +3
Query: 213 QPMKFLKKPDTKTMWSCIVP-----SDSRTSLKTHLLPST 317
+PMK K+ T+ WSC P +D LK H +PST
Sbjct: 86 KPMKITKEDGTEWKWSCFRPWETYKADLTIDLKKHHVPST 125
>At2g42070.1 68415.m05202 MutT/nudix family protein similar to
SP|Q58549 ADP-ribose pyrophosphatase (EC 3.6.1.13)
{Methanococcus jannaschii}; contains Pfam profile
PF00293: NUDIX domain
Length = 280
Score = 28.7 bits (61), Expect = 1.7
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = -1
Query: 198 VTSSLNLSAVFRNSPFRSDSFSKNPTTTTSSL 103
++SSLNLS+V +SP R FS PT +SSL
Sbjct: 32 ISSSLNLSSVTSSSPRR--IFSFKPTRMSSSL 61
>At4g37160.1 68417.m05261 multi-copper oxidase type I family protein
contains Pfam profile: PF00394 Multicopper oxidase
Length = 541
Score = 27.9 bits (59), Expect = 2.9
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -1
Query: 147 SDSFSKNPTTTTSSLEVKASKSATVRSSLELGPTW 43
S F+K TTT+SL + SK+A L +GPT+
Sbjct: 281 STRFTKPVLTTTASLRYQGSKNAAY-GPLPIGPTY 314
>At1g72890.1 68414.m08431 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 438
Score = 27.5 bits (58), Expect = 3.8
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +2
Query: 290 FEDSSVAFDGDTEKVSLKAFIKE--NYHGLVGVRQ 388
+ED S DG TEK+S K F ++ N + L+G+ Q
Sbjct: 184 WEDDSKLVDGITEKISTKLFSEKPRNDNILIGIDQ 218
>At4g18640.1 68417.m02759 leucine-rich repeat transmembrane protein
kinase, putative
Length = 686
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -1
Query: 372 RP**FSLMKALSDTFSVSPSKATDESSNLFWSRL 271
RP + + L +++P KAT SS L+W+ L
Sbjct: 645 RPSMKDVAEQLKQVINITPEKATPRSSPLWWAEL 678
>At3g28980.1 68416.m03622 expressed protein
Length = 445
Score = 27.1 bits (57), Expect = 5.1
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +2
Query: 53 PSSKELLTVADFEAFTSKDEVVVVGFFEKESDLKGEFLKTADKLR 187
P ++ TV D E +T K +V V EKE +F +KLR
Sbjct: 34 PQIEDPKTVKDVEPYTVKVVMVFVADLEKECPKTNKFKAFFEKLR 78
>At1g61970.1 68414.m06990 mitochondrial transcription termination
factor-related / mTERF-related contains Pfam profile
PF02536: mTERF
Length = 418
Score = 27.1 bits (57), Expect = 5.1
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 134 EKESDLKGEFLKTADKLREEVTFAHSSANEVLEKTGYKNNVVLY 265
EK K +FL++ E+T SS E+L K G+K V Y
Sbjct: 117 EKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYY 160
>At1g54130.1 68414.m06171 RelA/SpoT protein, putative (RSH3)
identical to RSH3 (RelA/SpoT homolog) GI:7141308 from
[Arabidopsis thaliana]; contains Pfam profiles PF01966:
HD domain, PF04607: Region found in RelA / SpoT proteins
Length = 712
Score = 27.1 bits (57), Expect = 5.1
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 53 PSSKELLTVADFEAFTSKDEVVVVGFFEKESDLKGEFLKTAD 178
P +++LL A + +DE V+ F+E E +G+ T D
Sbjct: 194 PYARDLLRRAQLKHKIFEDESVIKAFYEAEKAHRGQMRATGD 235
>At2g33740.2 68415.m04137 copper-binding protein (CUTA) identical to
copper-binding protein CUTA GI:12963361 from
[Arabidopsis thaliana]; contains Pfam profile: PF03091
CutA1 divalent ion tolerance protein
Length = 182
Score = 26.6 bits (56), Expect = 6.7
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = -1
Query: 198 VTSSLNLSAVFRNSPFRS---DSFSKNPTTTTSSLEVKASKSATVRSSLELGPTWARMYL 28
V S+L++S++ +SPF+S SFS P + S S + S + P+ +Y+
Sbjct: 27 VLSTLSISSLSSSSPFKSGCAQSFSVVPLLRSKFSSKAFSSSIRMEESSKTVPSIV-VYV 85
Query: 27 TCPRAE 10
T P E
Sbjct: 86 TVPNRE 91
>At2g33740.1 68415.m04136 copper-binding protein (CUTA) identical to
copper-binding protein CUTA GI:12963361 from
[Arabidopsis thaliana]; contains Pfam profile: PF03091
CutA1 divalent ion tolerance protein
Length = 156
Score = 26.6 bits (56), Expect = 6.7
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = -1
Query: 198 VTSSLNLSAVFRNSPFRS---DSFSKNPTTTTSSLEVKASKSATVRSSLELGPTWARMYL 28
V S+L++S++ +SPF+S SFS P + S S + S + P+ +Y+
Sbjct: 27 VLSTLSISSLSSSSPFKSGCAQSFSVVPLLRSKFSSKAFSSSIRMEESSKTVPSIV-VYV 85
Query: 27 TCPRAE 10
T P E
Sbjct: 86 TVPNRE 91
>At2g20720.1 68415.m02433 pentatricopeptide (PPR) repeat-containing
protein contains Pfam TIGR00756: pentatricopeptide
repeat domain
Length = 299
Score = 26.6 bits (56), Expect = 6.7
Identities = 33/123 (26%), Positives = 51/123 (41%), Gaps = 9/123 (7%)
Frame = +2
Query: 56 SSKELLTVADFEAFTSKDEVVVVG-----FFEKESDLKGEFL-KTADKLREEVTFAHSSA 217
S ++ V E F SK EV++ +F ++ F+ K LR TF
Sbjct: 41 SMASVVDVQGVEKFLSKWEVMIQDKWTTFYFPGLVYIRAGFMEKGLALLRRSETFVDDGC 100
Query: 218 NEVLE---KTGYKNNVVLYRPKRLQNKFEDSSVAFDGDTEKVSLKAFIKENYHGLVGVRQ 388
E++ T Y N + RL N +D ++FD +KAF K+ L GV +
Sbjct: 101 REIIYGCLMTVYCNENLTEDVYRLWNLAKDYGISFDSSRCSDIVKAFTKKG--DLDGVME 158
Query: 389 KDN 397
+ N
Sbjct: 159 EWN 161
>At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a
'Morpheus molecule') [Arabidopsis thaliana]
gi|8132770|gb|AAF73381.1|
Length = 2001
Score = 26.6 bits (56), Expect = 6.7
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 339 SDTFSVSPSKATDESS-NLFWSRLGRYKTTLFLYP 238
S F K +DE S N+FWS+L K ++ YP
Sbjct: 794 STLFGEDHIKLSDEESPNIFWSKLLGGKNPMWKYP 828
>At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a
'Morpheus molecule') [Arabidopsis thaliana]
gi|8132770|gb|AAF73381.1|
Length = 2001
Score = 26.6 bits (56), Expect = 6.7
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 339 SDTFSVSPSKATDESS-NLFWSRLGRYKTTLFLYP 238
S F K +DE S N+FWS+L K ++ YP
Sbjct: 794 STLFGEDHIKLSDEESPNIFWSKLLGGKNPMWKYP 828
>At3g17520.1 68416.m02238 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to PIR|S04045|S04045 embryonic
abundant protein D-29 [Gossypium hirsutum]; contains
Pfam profile PF02987: Late embryogenesis abundant
protein
Length = 298
Score = 26.2 bits (55), Expect = 8.9
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 47 VGPSSKELLTVADFEAFTSKDEVV--VVGFFEKESDLKGEFLKTADKLREEVTFAHSSAN 220
V +KE A +A +K+++ V EK SD+ + A+KL+EE SA
Sbjct: 178 VSEKAKEAKEAAKRKAGDAKEKLAETVETAKEKASDMTSAAKEKAEKLKEEAERESKSAK 237
Query: 221 EVLEKT 238
E ++++
Sbjct: 238 EKIKES 243
>At1g62085.1 68414.m07006 mitochondrial transcription termination
factor family protein / mTERF family protein contains
Pfam profile PF02536: mTERF
Length = 461
Score = 26.2 bits (55), Expect = 8.9
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +2
Query: 116 VVVGFFEKESDLKGEFLKTADKLREEVTFAHSSANEVLEKTGYKNNVVLY 265
++V EK K +FL++ R E+T S+ E+L K G K + Y
Sbjct: 114 LLVADAEKSIGPKLQFLQSRGASRSELTHIVSTVPEILGKRGDKTISIYY 163
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,303,578
Number of Sequences: 28952
Number of extensions: 182617
Number of successful extensions: 711
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 635399168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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