Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1041
         (364 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    26   0.14 
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   2.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   2.2  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   2.2  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   2.2  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   3.9  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   5.1  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    20   6.8  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    20   6.8  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    20   9.0  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 25.8 bits (54), Expect = 0.14
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = -1

Query: 148 CFLYIKIGD--YIVITFSFIYCYLTCYTYFVFCSKIPHFIFDIVFQLMIK 5
           C LY+   D  Y        + + T   YF FCS  PH ++D  F+L+IK
Sbjct: 317 CELYMAFMDRLYFSNLDKDAFIHRTVDDYF-FCSPHPHKVYD--FELLIK 363


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -2

Query: 108 PSVLFTVISRVIHILSSVVKFPILFLT*FFNL 13
           P    T ++++  IL       ++FLT FFN+
Sbjct: 59  PRKYSTPLAKITTILQRYCSVLLVFLTYFFNI 90


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
 Frame = -1

Query: 154 FACFLYIKIGDYIVITFSFIYCY--LTC--YTYFVFCSKIPHFIF 32
           F C   I    +++ T+ F Y +  L C  Y Y+ F     H +F
Sbjct: 85  FYCPFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLF 129


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -2

Query: 108 PSVLFTVISRVIHILSSVVKFPILFLT*FFNL 13
           P    T ++++  IL       ++FLT FFN+
Sbjct: 55  PRKYSTPLAKITTILQRYCSVLLVFLTYFFNI 86


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 293 SCSIDSVAAMHVQANGIVHY 352
           S +IDSVA     ++GI HY
Sbjct: 481 SRAIDSVACSKTVSDGIRHY 500


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -1

Query: 112 ITFSFIYCY 86
           I FSF YCY
Sbjct: 268 IVFSFCYCY 276



 Score = 19.8 bits (39), Expect = 9.0
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -1

Query: 112 ITFSFIYCY 86
           I F+F YCY
Sbjct: 549 IVFAFCYCY 557


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 7/27 (25%), Positives = 12/27 (44%)
 Frame = -1

Query: 130 IGDYIVITFSFIYCYLTCYTYFVFCSK 50
           + + + + F F Y Y  C    +F  K
Sbjct: 146 LAEAVQLYFQFYYTYFLCVIVCIFRGK 172


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +2

Query: 302 IDSVAAMHVQANGIVH 349
           +D VAA+H++     H
Sbjct: 261 VDQVAALHIKLTDTAH 276


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +2

Query: 302 IDSVAAMHVQANGIVH 349
           +D VAA+H++     H
Sbjct: 261 VDQVAALHIKLTDTAH 276


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = -1

Query: 172 LFSFDPFACFLYIKIGDYIVITFSFIYCYLTCYTYFVFCS 53
           L+SFD FA  +      YI    +F+  Y+        CS
Sbjct: 143 LYSFDLFANGITFGWHTYIFDVPNFVNEYVQAIEVLYICS 182


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,395
Number of Sequences: 336
Number of extensions: 1993
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7404950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)