Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG1041
(364 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_03_0017 + 8990852-8990938,8991056-8991243,8991687-8991795,899... 77 4e-15
02_05_1210 - 34954006-34955412 43 6e-05
07_01_0632 + 4729426-4731300 28 2.0
05_05_0055 + 21977546-21978061,21978144-21978162,21978168-219784... 27 3.4
10_07_0176 - 13826764-13827064,13827271-13827377,13827474-138278... 27 4.5
05_07_0347 - 29440541-29440664,29440908-29441020,29441522-294416... 27 4.5
08_02_0585 + 19014674-19014871,19014987-19015132,19016742-190168... 27 6.0
06_02_0303 + 14022428-14022652,14023247-14024159,14024310-140247... 27 6.0
05_04_0179 + 18784011-18784240,18785035-18785119,18785905-187861... 27 6.0
03_02_0928 + 12464325-12464498,12466494-12466679,12466929-124670... 27 6.0
09_04_0170 + 15310240-15310397,15310523-15310605,15310689-153106... 26 7.9
>11_03_0017 +
8990852-8990938,8991056-8991243,8991687-8991795,
8992448-8992832,8993240-8993309,8993410-8993477,
8995009-8995124,8995211-8995317,8995488-8995627,
8995794-8996044
Length = 506
Score = 77.0 bits (181), Expect = 4e-15
Identities = 32/87 (36%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Frame = +2
Query: 113 DDIITNFDIKETCKWIERKKFAKVCLQFPDDLLEVSCKVYKEIKDRIE---VDLYIMGDT 283
DDI +++ T ++I + + +V LQFPD++L + V + ++ + V L++M DT
Sbjct: 3 DDIDARYEVPRTAEFIRARAYTRVALQFPDEMLRDAAAVAQALRRELGGGGVKLFVMADT 62
Query: 284 SYASCSIDSVAAMHVQANGIVHYGHKC 364
+Y SC +D V A H+ A +VHYGH C
Sbjct: 63 AYNSCCVDEVGASHIDAQCVVHYGHAC 89
>02_05_1210 - 34954006-34955412
Length = 468
Score = 43.2 bits (97), Expect = 6e-05
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Frame = +2
Query: 128 NFDIKETCKWIERKKFAKVCLQFPDDLLEVSCKVYKEIKDRIEVD----LYIMGDTSYAS 295
NF++ +T I + LQ P+ LL S + + +E D + I+ D +Y +
Sbjct: 59 NFELPKTAHRIRSSGARRTALQLPEGLLLFSLPLSHLLAPFLEPDPSNDVLILADPTYGA 118
Query: 296 CSIDSVAAMHVQANGIVHYGHKC 364
C + A + A+ +VHYGH C
Sbjct: 119 CCLADRPAKALAADVLVHYGHSC 141
>07_01_0632 + 4729426-4731300
Length = 624
Score = 28.3 bits (60), Expect = 2.0
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1
Query: 166 SFDPFACFLYIKIG 125
S DPF CFLYI IG
Sbjct: 239 SVDPFFCFLYISIG 252
>05_05_0055 +
21977546-21978061,21978144-21978162,21978168-21978486,
21978779-21978799,21980780-21980857,21981116-21981359
Length = 398
Score = 27.5 bits (58), Expect = 3.4
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +2
Query: 158 IERKKFAKVCLQFPDDLLEVSCKVYKEIKDRIEVDLYIMGDTSYASCSI 304
+E KFA +CL F +++V C +KE D+ +VDL Y S +I
Sbjct: 255 VELDKFAALCLIFLAHIVQV-C--FKEETDKKQVDLLRSNRYYYCSTAI 300
>10_07_0176 -
13826764-13827064,13827271-13827377,13827474-13827836,
13827912-13828079,13828153-13828374,13828784-13829023,
13829640-13829719,13829853-13830018,13830720-13830783,
13830861-13830962,13831085-13831227,13831370-13831474,
13831551-13831706,13832125-13832241,13832315-13832392,
13832466-13832550,13833334-13833455,13833546-13833611,
13835190-13835284,13835427-13835523,13835873-13835983,
13836083-13836164,13836292-13836353,13836620-13836685,
13838002-13838232
Length = 1142
Score = 27.1 bits (57), Expect = 4.5
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +2
Query: 74 ITREITVNKTEGYDDIITNFDIKETCKWIERKKFAKVCLQFPDDLLEVSCKVYKEIKDRI 253
I RE V + D+ ++I ++ +K V +FP+ L + CKV + I
Sbjct: 546 IVRESHVERMGSIQDVA--YEILNVLEFNSTRKRQSVVCRFPNGRLVLYCKV----AELI 599
Query: 254 EVDLYIMGDTS 286
E DL ++G T+
Sbjct: 600 EKDLVLVGCTA 610
>05_07_0347 -
29440541-29440664,29440908-29441020,29441522-29441689,
29442341-29442391,29442518-29442555,29442885-29442978
Length = 195
Score = 27.1 bits (57), Expect = 4.5
Identities = 22/75 (29%), Positives = 32/75 (42%)
Frame = +2
Query: 137 IKETCKWIERKKFAKVCLQFPDDLLEVSCKVYKEIKDRIEVDLYIMGDTSYASCSIDSVA 316
I E ERK F V ++ E + K Y ++KDR + G + S V
Sbjct: 62 ISEILSRFERKGFKLVAIKLVVPSKEFAQKHYHDLKDR----PFFNGLCDFLSSG--PVL 115
Query: 317 AMHVQANGIVHYGHK 361
AM + G++ YG K
Sbjct: 116 AMVWEGEGVIKYGRK 130
>08_02_0585 +
19014674-19014871,19014987-19015132,19016742-19016844,
19017064-19017250,19017368-19017461,19017570-19017723,
19018076-19018192,19018276-19018296,19019096-19019209,
19019970-19020152,19021032-19021239,19021326-19021447,
19021559-19021656,19021875-19022052,19022130-19022244,
19022331-19022398,19022526-19022603,19023737-19023814,
19023897-19024082
Length = 815
Score = 26.6 bits (56), Expect = 6.0
Identities = 16/69 (23%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +2
Query: 17 LKNYVKNKMGNFTTEDKICITREITVNKTE-GYDDIITNF--DIKETCKWIERKKFAKVC 187
+ ++VK+ + FTTE+K E KT+ ++ + ++ + +WIE +
Sbjct: 744 ISDFVKSTVSRFTTEEKAAEVSEFFAGKTKPSFERALKQSLERVRISARWIESIRSEPNL 803
Query: 188 LQFPDDLLE 214
Q ++LL+
Sbjct: 804 AQTVNELLQ 812
>06_02_0303 +
14022428-14022652,14023247-14024159,14024310-14024700,
14024949-14025206,14025284-14025394,14025486-14025564,
14025842-14026027
Length = 720
Score = 26.6 bits (56), Expect = 6.0
Identities = 12/47 (25%), Positives = 18/47 (38%)
Frame = +2
Query: 185 CLQFPDDLLEVSCKVYKEIKDRIEVDLYIMGDTSYASCSIDSVAAMH 325
C PDD +V + E E+D D Y ++D + H
Sbjct: 310 CQDIPDDYAKVEVRTVNEDHRMYEIDFPTPEDIVYLGDAVDQIILWH 356
>05_04_0179 +
18784011-18784240,18785035-18785119,18785905-18786102,
18786347-18786527,18787026-18787315,18787583-18787771,
18788316-18788792
Length = 549
Score = 26.6 bits (56), Expect = 6.0
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +2
Query: 161 ERKKFAKVCLQFPDDLLEVSCKVYKEIKDRIEVDLYIMGDTSYA 292
+R F +Q L + KE D E+ +Y MGD +YA
Sbjct: 235 DRSLFTLETMQMLTKLRPFVRRFLKEASDMFEMYIYTMGDKAYA 278
>03_02_0928 +
12464325-12464498,12466494-12466679,12466929-12467021,
12467212-12467394,12467506-12467608,12467695-12467865,
12468086-12469084,12469178-12469254,12469485-12470337,
12470878-12471000,12471526-12471878
Length = 1104
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 254 EVDLYIMGDTSYASCSIDSV 313
+VDL ++G+TSY S ID +
Sbjct: 75 DVDLTVLGNTSYGSTLIDDI 94
>09_04_0170 +
15310240-15310397,15310523-15310605,15310689-15310697,
15310852-15310940,15311514-15311587,15311731-15311781,
15311887-15311963,15313865-15314463
Length = 379
Score = 26.2 bits (55), Expect = 7.9
Identities = 9/40 (22%), Positives = 22/40 (55%)
Frame = +2
Query: 41 MGNFTTEDKICITREITVNKTEGYDDIITNFDIKETCKWI 160
+G + T+++ + ++ + G + +TNFD+ KW+
Sbjct: 177 LGTYATQEEAAMAYDMAAIEYRGLN-AVTNFDLSRYIKWL 215
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,227,914
Number of Sequences: 37544
Number of extensions: 165939
Number of successful extensions: 384
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 382
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 566473892
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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