Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1040
         (611 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0037 - 19478885-19480472,19483125-19483267                       30   1.7  
08_01_0889 + 8753877-8754236,8754995-8755054,8755174-8755250,875...    30   1.7  
09_06_0260 - 21911358-21911438,21911715-21911828,21911911-219120...    28   6.7  
07_03_0124 - 13723597-13724657,13726179-13726413                       28   6.7  
03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,951...    27   8.9  

>11_06_0037 - 19478885-19480472,19483125-19483267
          Length = 576

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +2

Query: 89  FTALVGYRVLTILGRNIHFPEYKFLTSRRYNSLVQVPIYKETK 217
           F A  GYR   +LGRN  F +++   ++R + LV   +  E +
Sbjct: 32  FEAATGYRADEVLGRNCRFLQFRDPRAQRRHPLVDPMVVSEIR 74


>08_01_0889 +
           8753877-8754236,8754995-8755054,8755174-8755250,
           8755481-8755622,8755736-8755772,8755852-8755921,
           8756021-8756212,8756321-8756413,8756545-8756773,
           8756861-8756944,8757041-8757192,8757279-8757375,
           8757576-8757725,8757813-8757890,8757982-8758104,
           8758169-8758315,8758418-8758472,8758807-8758874
          Length = 737

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +1

Query: 364 HLCNILYKVKKYLHTPSTKRSCTY 435
           H C     V++ LHTP++ RSCT+
Sbjct: 310 HPCRANVAVRRELHTPASDRSCTH 333


>09_06_0260 -
           21911358-21911438,21911715-21911828,21911911-21912033,
           21912342-21912419,21912498-21912647,21913505-21913601,
           21913679-21913860,21913899-21913982,21914243-21914303,
           21914414-21914506,21914588-21914782,21914937-21915006,
           21915536-21915572,21915654-21915737,21915828-21915885,
           21916008-21916084,21916185-21916244,21916325-21916687
          Length = 668

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 358 LSHLCNILYKVKKYLHTPSTKRSCTY 435
           + H C     V++ LHTP++ RSC +
Sbjct: 310 IQHPCRANVAVRRELHTPASYRSCIH 335


>07_03_0124 - 13723597-13724657,13726179-13726413
          Length = 431

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = -2

Query: 262 IILTAYCINGCIPCVFGFFVNGYLY*AVV 176
           ++L++ C  GC   +F FF +G ++ A+V
Sbjct: 346 VLLSSQCPPGCEGSLFAFFTSGLVFSAIV 374


>03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,
            9515765-9516102,9516191-9516329,9517083-9517152,
            9517201-9517307,9517387-9517437,9517549-9517660,
            9517783-9517869,9517958-9518133,9518479-9518586,
            9518654-9518812,9518888-9518971,9519053-9519258,
            9519565-9519666,9519768-9519877,9519963-9520114,
            9520380-9520548,9520841-9520878,9521963-9522571,
            9523314-9523784,9523786-9523871,9524396-9524906,
            9525388-9525412,9526001-9526051,9526228-9526301,
            9526412-9526534,9526667-9526738,9526924-9527020,
            9527174-9527283
          Length = 1649

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 9/22 (40%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
 Frame = -2

Query: 259  ILTAYCI-NGCIPCVFGFFVNG 197
            ++ A C+ N C+PC++GF + G
Sbjct: 1253 LVVASCLKNSCVPCIYGFGLFG 1274


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,594,394
Number of Sequences: 37544
Number of extensions: 207907
Number of successful extensions: 337
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 337
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1466594128
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)