Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1040
         (611 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr...    28   4.6  
U21309-6|AAT92086.1|  541|Caenorhabditis elegans Hypothetical pr...    28   6.0  
U21309-5|AAT92085.1|  536|Caenorhabditis elegans Hypothetical pr...    28   6.0  
U21309-4|AAN73883.1|  546|Caenorhabditis elegans Hypothetical pr...    28   6.0  
AY314778-1|AAQ84885.1|  546|Caenorhabditis elegans calcitonin re...    28   6.0  
AY314777-1|AAQ84884.1|  541|Caenorhabditis elegans calcitonin re...    28   6.0  
AY314776-1|AAQ84883.1|  536|Caenorhabditis elegans calcitonin re...    28   6.0  

>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical
           protein H05G16.1 protein.
          Length = 1111

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = -2

Query: 604 ELCAAYHSIKCDIQGFFFVCSNASNLRFNRNETIMYYFLTIPTDA 470
           E+C   + ++CD  G  F+  N ++   +R +TI+       TDA
Sbjct: 73  EVCRHLNLLECDYFGLSFIDINGNHCWLDREKTILRQITNGSTDA 117


>U21309-6|AAT92086.1|  541|Caenorhabditis elegans Hypothetical
           protein C13B9.4c protein.
          Length = 541

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
 Frame = -1

Query: 509 NNYVLFFNYTHRCNMSYK------VSKYCCSYVQLRFVLGV*RYFFTLYRMLHKCDNE 354
           +N ++F  +T+  + +Y        S YC +  ++  VL   + F+  YR+LHK  NE
Sbjct: 402 DNIMVFAVWTYTASFTYMYQGLMVASIYCFTNKEVNHVL---KTFYARYRLLHKSQNE 456


>U21309-5|AAT92085.1|  536|Caenorhabditis elegans Hypothetical
           protein C13B9.4b protein.
          Length = 536

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
 Frame = -1

Query: 509 NNYVLFFNYTHRCNMSYK------VSKYCCSYVQLRFVLGV*RYFFTLYRMLHKCDNE 354
           +N ++F  +T+  + +Y        S YC +  ++  VL   + F+  YR+LHK  NE
Sbjct: 392 DNIMVFAVWTYTASFTYMYQGLMVASIYCFTNKEVNHVL---KTFYARYRLLHKSQNE 446


>U21309-4|AAN73883.1|  546|Caenorhabditis elegans Hypothetical
           protein C13B9.4a protein.
          Length = 546

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
 Frame = -1

Query: 509 NNYVLFFNYTHRCNMSYK------VSKYCCSYVQLRFVLGV*RYFFTLYRMLHKCDNE 354
           +N ++F  +T+  + +Y        S YC +  ++  VL   + F+  YR+LHK  NE
Sbjct: 402 DNIMVFAVWTYTASFTYMYQGLMVASIYCFTNKEVNHVL---KTFYARYRLLHKSQNE 456


>AY314778-1|AAQ84885.1|  546|Caenorhabditis elegans calcitonin
           receptor-like proteinSEB-1C protein.
          Length = 546

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
 Frame = -1

Query: 509 NNYVLFFNYTHRCNMSYK------VSKYCCSYVQLRFVLGV*RYFFTLYRMLHKCDNE 354
           +N ++F  +T+  + +Y        S YC +  ++  VL   + F+  YR+LHK  NE
Sbjct: 402 DNIMVFAVWTYTASFTYMYQGLMVASIYCFTNKEVNHVL---KTFYARYRLLHKSQNE 456


>AY314777-1|AAQ84884.1|  541|Caenorhabditis elegans calcitonin
           receptor-like proteinSEB-1B protein.
          Length = 541

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
 Frame = -1

Query: 509 NNYVLFFNYTHRCNMSYK------VSKYCCSYVQLRFVLGV*RYFFTLYRMLHKCDNE 354
           +N ++F  +T+  + +Y        S YC +  ++  VL   + F+  YR+LHK  NE
Sbjct: 402 DNIMVFAVWTYTASFTYMYQGLMVASIYCFTNKEVNHVL---KTFYARYRLLHKSQNE 456


>AY314776-1|AAQ84883.1|  536|Caenorhabditis elegans calcitonin
           receptor-like proteinSEB-1A protein.
          Length = 536

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
 Frame = -1

Query: 509 NNYVLFFNYTHRCNMSYK------VSKYCCSYVQLRFVLGV*RYFFTLYRMLHKCDNE 354
           +N ++F  +T+  + +Y        S YC +  ++  VL   + F+  YR+LHK  NE
Sbjct: 392 DNIMVFAVWTYTASFTYMYQGLMVASIYCFTNKEVNHVL---KTFYARYRLLHKSQNE 446


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,196,156
Number of Sequences: 27780
Number of extensions: 236898
Number of successful extensions: 520
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 520
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)