Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG1031
(668 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292339-1|CAL23151.2| 387|Tribolium castaneum gustatory recept... 24 1.3
AM292338-1|CAL23150.2| 372|Tribolium castaneum gustatory recept... 24 1.3
AM712901-1|CAN84640.1| 205|Tribolium castaneum hypothetical pro... 23 1.7
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 23 3.0
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 22 5.2
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 22 5.2
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 5.2
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 5.2
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 21 6.9
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 21 6.9
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 6.9
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 6.9
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 9.1
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 9.1
>AM292339-1|CAL23151.2| 387|Tribolium castaneum gustatory receptor
candidate 18 protein.
Length = 387
Score = 23.8 bits (49), Expect = 1.3
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 479 NSFTAFGVVWEFLLVVAMFTD 541
+SF+ FG+VW L+ V + D
Sbjct: 236 DSFSIFGLVWISLIFVVLIGD 256
>AM292338-1|CAL23150.2| 372|Tribolium castaneum gustatory receptor
candidate 17 protein.
Length = 372
Score = 23.8 bits (49), Expect = 1.3
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 479 NSFTAFGVVWEFLLVVAMFTD 541
+SF+ FG+VW L+ V + D
Sbjct: 236 DSFSIFGLVWISLIFVVLIGD 256
>AM712901-1|CAN84640.1| 205|Tribolium castaneum hypothetical
protein protein.
Length = 205
Score = 23.4 bits (48), Expect = 1.7
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 140 IQFKYKKRKLFKTIQYFI*LIYLMPV 217
I K K RK + ++YFI IY++ +
Sbjct: 28 IYHKEKYRKFCRILKYFIIAIYVLTI 53
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 22.6 bits (46), Expect = 3.0
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 111 YCFCYYSI 88
+C+CYYSI
Sbjct: 553 FCYCYYSI 560
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 21.8 bits (44), Expect = 5.2
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +3
Query: 231 PIYYYHTIP*RTKINKNHCPLICHPI 308
P Y +P + N ++CP HP+
Sbjct: 330 PYTLYFRMPHKCNGNAHNCPSRSHPV 355
Score = 21.4 bits (43), Expect = 6.9
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = -1
Query: 632 RILAIFHYHD*MCPSGSVRCG 570
++L F + +CP G + CG
Sbjct: 97 KVLPNFKTDEPICPDGKLSCG 117
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 21.8 bits (44), Expect = 5.2
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +3
Query: 231 PIYYYHTIP*RTKINKNHCPLICHPI 308
P Y +P + N ++CP HP+
Sbjct: 337 PYTLYFRMPHKCNGNAHNCPSRSHPV 362
Score = 21.4 bits (43), Expect = 6.9
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = -1
Query: 632 RILAIFHYHD*MCPSGSVRCG 570
++L F + +CP G + CG
Sbjct: 104 KVLPNFKTDEPICPDGKLSCG 124
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.2
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -3
Query: 561 IRWPFGPSVNI 529
I+WPFG NI
Sbjct: 1295 IKWPFGVKTNI 1305
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.2
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -3
Query: 561 IRWPFGPSVNI 529
I+WPFG NI
Sbjct: 1295 IKWPFGVKTNI 1305
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 21.4 bits (43), Expect = 6.9
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -1
Query: 599 MCPSGSVRCG 570
+CP GS+ CG
Sbjct: 116 LCPDGSLACG 125
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.4 bits (43), Expect = 6.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 137 FIQFKYKKRKLFKTIQYFI*LIYLMPV 217
FI+ K +K FKT YFI ++ PV
Sbjct: 37 FIRALGKSKKEFKTRTYFI-YAFVAPV 62
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.4 bits (43), Expect = 6.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 137 FIQFKYKKRKLFKTIQYFI*LIYLMPV 217
FI+ K +K FKT YFI ++ PV
Sbjct: 270 FIRALGKSKKEFKTRTYFI-YAFVAPV 295
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.4 bits (43), Expect = 6.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 137 FIQFKYKKRKLFKTIQYFI*LIYLMPV 217
FI+ K +K FKT YFI ++ PV
Sbjct: 270 FIRALGKSKKEFKTRTYFI-YAFVAPV 295
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.1
Identities = 7/22 (31%), Positives = 10/22 (45%)
Frame = -3
Query: 570 QASIRWPFGPSVNIATTRRNSQ 505
Q ++WP G NI S+
Sbjct: 1292 QIHVKWPLGVRTNITYIEETSE 1313
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.1
Identities = 7/22 (31%), Positives = 10/22 (45%)
Frame = -3
Query: 570 QASIRWPFGPSVNIATTRRNSQ 505
Q ++WP G NI S+
Sbjct: 1292 QIHVKWPLGVRTNITYIEETSE 1313
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,100
Number of Sequences: 336
Number of extensions: 3381
Number of successful extensions: 18
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -