Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1028
         (660 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    22   4.5  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         22   4.5  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    22   4.5  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    22   4.5  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   4.5  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    22   6.0  

>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 97  IINN*VPRCYPRLLSY 50
           ++NN  P C P+LL++
Sbjct: 148 LVNNNQPMCSPKLLTF 163


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 97  IINN*VPRCYPRLLSY 50
           ++NN  P C P+LL++
Sbjct: 142 LVNNTQPMCSPKLLTF 157


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 97  IINN*VPRCYPRLLSY 50
           ++NN  P C P+LL++
Sbjct: 142 LVNNTQPMCSPKLLTF 157


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 97  IINN*VPRCYPRLLSY 50
           ++NN  P C P+LL++
Sbjct: 142 LVNNTQPMCSPKLLTF 157


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 384 ISLRKGSLNKRPKRKYDDIVYSEHCEL 304
           + +RK     RP    +  +Y+ HCEL
Sbjct: 105 VCMRKCPRRHRPVCASNGKIYANHCEL 131


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 503 PIPDLVFSITQR 468
           P PD+VF+IT R
Sbjct: 222 PYPDIVFNITLR 233


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,380
Number of Sequences: 438
Number of extensions: 3815
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)