Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG1027
(624 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42290| Best HMM Match : Band_41 (HMM E-Value=3.6e-09) 84 8e-17
SB_57953| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_5728| Best HMM Match : Band_41 (HMM E-Value=1e-26) 51 7e-07
SB_39972| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_31352| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_26502| Best HMM Match : Band_41 (HMM E-Value=1.4e-16) 40 0.001
SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_57668| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.082
SB_14271| Best HMM Match : Pkinase (HMM E-Value=2.1e-27) 34 0.11
SB_55684| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_46719| Best HMM Match : zf-nanos (HMM E-Value=3.9) 32 0.33
SB_12391| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_2610| Best HMM Match : F5_F8_type_C (HMM E-Value=4.5e-29) 29 3.1
SB_15581| Best HMM Match : F5_F8_type_C (HMM E-Value=3.7e-11) 29 3.1
SB_33413| Best HMM Match : DUF81 (HMM E-Value=0.31) 29 4.1
SB_6928| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_8639| Best HMM Match : WD40 (HMM E-Value=1.9e-22) 28 5.4
SB_9384| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_15962| Best HMM Match : DUF528 (HMM E-Value=0.083) 28 7.1
SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43) 28 7.1
SB_23153| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_46239| Best HMM Match : Phage_integrase (HMM E-Value=0.24) 27 9.4
>SB_42290| Best HMM Match : Band_41 (HMM E-Value=3.6e-09)
Length = 474
Score = 84.2 bits (199), Expect = 8e-17
Identities = 55/119 (46%), Positives = 72/119 (60%), Gaps = 6/119 (5%)
Frame = +3
Query: 240 IGQECLEKVCEKLEIGAEADYFGLRVCPGSGPGRWLNLRNP----LDPHRIPGG--RLDL 401
+GQE L+KVC++L+I E +YFGL+ C WLNLRNP L PH +PG RL L
Sbjct: 22 LGQEVLDKVCDELKI-KEKNYFGLKYCVND-TNVWLNLRNPVLTQLRPH-LPGKPYRLRL 78
Query: 402 RVKFWVPPHLLINEPTRHQFYLHAKLDLTEGRLVVADLEVARRIVAYIAQAETGDCTPE 578
VKF+V P L E TR QFY K ++EG+ + E A R+ A +AQ+E GD + E
Sbjct: 79 EVKFFVAPKELQQEETRWQFYFCLKNQISEGKFNLT-REKAVRLCALMAQSEYGDYSSE 136
>SB_57953| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 712
Score = 58.8 bits (136), Expect = 3e-09
Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Frame = +3
Query: 261 KVCEKLEIGAEADYFGLRVCPGSGPGRWLNLRNPLDPHRIP---GGRLDLRVKFWVPPHL 431
+VC K ++ AE DYFGLR +G RW+NLRN L P G L+LRVK++V
Sbjct: 439 QVCRKHDLSAEVDYFGLRYVQ-AGDARWINLRNSLREQLSPGVLGSALELRVKYFVNYSQ 497
Query: 432 LINEPTRH 455
L+ E TRH
Sbjct: 498 LLLEETRH 505
>SB_5728| Best HMM Match : Band_41 (HMM E-Value=1e-26)
Length = 906
Score = 51.2 bits (117), Expect = 7e-07
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 7/121 (5%)
Frame = +3
Query: 216 EILVDPNAIGQECLEKVCEKLEIGAEADYFGLRVCPGSGPGRWLNLRNPLDPHRIPGGR- 392
++++ + G +CLE + EKL + E YFGL+ G WL+L P+ GR
Sbjct: 597 DLILSDGSTGSDCLEIIAEKLGL-TETAYFGLQY-RKKGDDWWLDLAKPVAKQLSNHGRI 654
Query: 393 -----LDLRVKFWV-PPHLLINEPTRHQFYLHAKLDLTEGRLVVADLEVARRIVAYIAQA 554
L RVK++V + L E R+ +YL K ++ G L++ D + A + +YIAQ
Sbjct: 655 AAVVTLKFRVKYFVCNAYSLQEEIARYLYYLQLKKNVLAG-LLLCDEQAAVVLASYIAQG 713
Query: 555 E 557
+
Sbjct: 714 D 714
>SB_39972| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 367
Score = 50.0 bits (114), Expect = 2e-06
Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Frame = +3
Query: 216 EILVDPNAIGQECLEKVCEKLEIGAEADYFGLR-VCPGSGPGRWLNLRNPLDPHRIPGG- 389
E +D G ++VC+ + + AE +YFGLR + G WL +
Sbjct: 21 ECPIDKTTKGDHLFDQVCDHIGL-AEKEYFGLRYIDEKDGQFNWLEGDRSIKRQMGKAPL 79
Query: 390 RLDLRVKFWVP-PHLLINEPTRHQFYLHAKLDLTEGRLVVADLEVARRIVAYIAQAETGD 566
VKF+ P L + TR+QF L + DL +GR+ ++ + + +Y+ QAE GD
Sbjct: 80 HFYFAVKFYPENPTTLREDITRYQFVLQLREDLLKGRIQCSN-PIHALLASYVMQAELGD 138
Query: 567 CTPE 578
PE
Sbjct: 139 LHPE 142
>SB_31352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 401
Score = 45.2 bits (102), Expect = 4e-05
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +3
Query: 438 NEPTRHQFYLHAKLDLTEGRLVVA--DLEVARRIVAYIAQAETGDCTPEMPPTH 593
N TRHQ+YL K + G+L ++ + RI A IAQ ETGD PE PP +
Sbjct: 6 NASTRHQYYLTLKSYICNGKLDLSASQTKTISRICALIAQIETGDHIPEKPPRY 59
>SB_26502| Best HMM Match : Band_41 (HMM E-Value=1.4e-16)
Length = 573
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +3
Query: 402 RVKFWVPPHLLINEP-TRHQFYLHAKLDLTEGRLVVADLEVARRIVAYIAQAETGD 566
RVK++V L+ + TRH +YL + D+ EG + V + E A + +Y QAE GD
Sbjct: 298 RVKYYVENICLLQQQSTRHLYYLQLRKDVLEGGIFVHE-ETAMLLASYALQAEVGD 352
>SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2437
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = +3
Query: 432 LINEPTRHQFYLHAKLDLTEGRLVVADLEVARRIVAYIAQAETGDCTPEM 581
+ N T+HQFYL + DL + RL + E A + QAETGD TP +
Sbjct: 417 ITNHKTKHQFYLQLRKDLLDCRLYCHE-EAALTLGGLALQAETGDYTPAL 465
>SB_57668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1107
Score = 34.3 bits (75), Expect = 0.082
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +3
Query: 234 NAIGQECLEKVCEKLEIGAEADYFGLRVCPGSGPGRWLNL 353
+A GQ + VC+ L++ E DYFGLR S WL+L
Sbjct: 2 DAKGQTVFDTVCKALDL-VEKDYFGLRYVDDSKQRHWLDL 40
>SB_14271| Best HMM Match : Pkinase (HMM E-Value=2.1e-27)
Length = 2056
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +1
Query: 214 WKSWWTQMRLVKSALRRYAR----NWRSVPRQTISVCACAQDQAPEDG 345
WK WWT+ R ++ + Y + W S P T V + ++ P+DG
Sbjct: 1856 WKEWWTRKRHLQMFTKAYTQMTDSQWDSCPSTTNPVESINRESVPKDG 1903
>SB_55684| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 33.1 bits (72), Expect = 0.19
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = +3
Query: 237 AIGQECLEKVCEKLEIGAEADYFGLRVCPGSGPGRWLNLRNPLDPHRIPGGRL 395
++G + KVCE L+IG E FGL C GS G+ PL G R+
Sbjct: 16 SLGTQRSFKVCELLKIGEETSAFGLLFCQGS-MGKLTGKLTPLRVWNACGNRV 67
>SB_46719| Best HMM Match : zf-nanos (HMM E-Value=3.9)
Length = 166
Score = 32.3 bits (70), Expect = 0.33
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +3
Query: 453 HQFYLHAKLDLTEGRLVVADLEVARRIVAYIAQAETGD 566
HQ +LH + D EGR VV + + R+ A +AQA GD
Sbjct: 2 HQHFLHLRKDF-EGRKVVTNPVKSARMYALLAQATIGD 38
>SB_12391| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 695
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +3
Query: 180 MWLVSQPNSVILEILVDPNAIGQECLEKVCEKLEIGAEADYFGLRVCPGS 329
+W+V +P S + ++V P ++G KV E+ + DY+ +R PG+
Sbjct: 450 IWVVHRPRSGMWSLMV-PFSVGSHSF-KVTASSELNIDFDYYFIRRLPGN 497
>SB_2610| Best HMM Match : F5_F8_type_C (HMM E-Value=4.5e-29)
Length = 334
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -2
Query: 233 WVHQDFQDHRIRLTD*PHFGQHFERKYVKFNKSGRKI-FSLMNLTHVTIV 87
W+ H RL + P GQH K+NK G + L +T +T V
Sbjct: 171 WIEPGHNPHHARLNNQPVGGQHIGAWAAKYNKKGEYLEVDLGQVTWITHV 220
>SB_15581| Best HMM Match : F5_F8_type_C (HMM E-Value=3.7e-11)
Length = 133
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -2
Query: 233 WVHQDFQDHRIRLTD*PHFGQHFERKYVKFNKSGRKI-FSLMNLTHVTIV 87
W+ H RL + P GQH K+NK G + L +T +T V
Sbjct: 17 WIEPGHNPHHARLNNQPVGGQHIGAWAAKYNKKGEYLEVDLGQVTWITHV 66
>SB_33413| Best HMM Match : DUF81 (HMM E-Value=0.31)
Length = 455
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +3
Query: 429 LLINEPTRHQFYLHAKLDLTEGRLVVADLEVARRIVAYIAQAETGDC 569
+L T+ FYL AK+ G D+EV RR+ Q T DC
Sbjct: 355 VLTGRMTKQSFYLPAKVSFHHG----IDVEVRRRVQDIDRQTVTDDC 397
>SB_6928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = -2
Query: 170 HFERKYVKFNKSGRKIFSLMNLTHVTIVYLTRAKYLFKKVLLNSLCEM 27
H ++Y++F KS I SL N V+ VY +YL NS+ +
Sbjct: 41 HIGQQYLQFTKSANSITSLPNRPTVSPVYQIGQQYLQFTKSANSISSL 88
>SB_8639| Best HMM Match : WD40 (HMM E-Value=1.9e-22)
Length = 442
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Frame = +3
Query: 357 NPLDPHRIPGGRLDLRVKFW-VPPHLL---INEP 446
NP D H I G D RV W +P H L I+EP
Sbjct: 24 NPFDDHMIATGSEDARVMIWQIPEHGLHSNISEP 57
>SB_9384| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 468
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Frame = +3
Query: 357 NPLDPHRIPGGRLDLRVKFW-VPPHLL---INEP 446
NP D H I G D RV W +P H L I+EP
Sbjct: 88 NPFDDHMIATGSEDARVMIWQIPEHGLHSNISEP 121
>SB_15962| Best HMM Match : DUF528 (HMM E-Value=0.083)
Length = 1466
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 192 SQPNSVILEILVDPNAIGQECLEKVCEKLEIGAEADYFGLRVCPGSGPG 338
+QP SV E P+ +E + +C+ L+IG + D P S PG
Sbjct: 1101 AQPQSVESEHPETPSDAAKESSQALCDLLQIGRKQDSKEAAKPPDSTPG 1149
>SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43)
Length = 1806
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 223 WWTQMRLVKSALRRYARNW-RSVPRQTISVCACAQDQAPEDGLTCGTPSI 369
W+ + L+KS + A W + VP+ +++ A + D +PE L TP +
Sbjct: 469 WYRNVHLLKS--HKCAPEWYQPVPQALVTLAASSTDSSPERVLLQLTPEV 516
>SB_23153| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 228 DPNAIGQECLEKVCEKLEIGAE 293
DP IG E +EK+C+ L++ E
Sbjct: 22 DPETIGPEGIEKLCQDLDVDPE 43
>SB_46239| Best HMM Match : Phage_integrase (HMM E-Value=0.24)
Length = 364
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Frame = +1
Query: 241 LVKSALRRYARNWRSVPRQTISVCACAQ---DQAPEDGLTCGTPSIRTAYPEDG 393
LV +L +ARNW S T+++C A D + +R Y E G
Sbjct: 41 LVSGSLSTFARNWESSNPLTLTLCLFASFLADFVQPSSIKVYLSGVRAMYIEQG 94
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,259,117
Number of Sequences: 59808
Number of extensions: 434925
Number of successful extensions: 1014
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1006
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1548368000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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