Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1027
         (624 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341191-1|AAR13755.1|  191|Anopheles gambiae GNBP B1 protein.         27   0.64 
AY341190-1|AAR13754.1|  191|Anopheles gambiae GNBP B1 protein.         27   0.64 
AY341189-1|AAR13753.1|  191|Anopheles gambiae GNBP B1 protein.         27   0.64 
AY341188-1|AAR13752.1|  191|Anopheles gambiae GNBP B1 protein.         27   0.64 
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    27   0.64 
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    27   0.64 
AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismuta...    26   1.1  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    25   1.5  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    25   2.6  
DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.       24   3.4  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    23   7.9  
AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.    23   7.9  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   7.9  

>AY341191-1|AAR13755.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 26.6 bits (56), Expect = 0.64
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 325 DQAPEDGLTCGTPSIRTAYPEDG*TSASSSGC 420
           DQ   D +T GT S++ +YP D  T+ +  GC
Sbjct: 98  DQFGLDFMTSGTLSLQGSYPTDHCTNDAFYGC 129


>AY341190-1|AAR13754.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 26.6 bits (56), Expect = 0.64
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 325 DQAPEDGLTCGTPSIRTAYPEDG*TSASSSGC 420
           DQ   D +T GT S++ +YP D  T+ +  GC
Sbjct: 98  DQFGLDFMTSGTLSLQGSYPTDHCTNDAFYGC 129


>AY341189-1|AAR13753.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 26.6 bits (56), Expect = 0.64
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 325 DQAPEDGLTCGTPSIRTAYPEDG*TSASSSGC 420
           DQ   D +T GT S++ +YP D  T+ +  GC
Sbjct: 98  DQFGLDFMTSGTLSLQGSYPTDHCTNDAFYGC 129


>AY341188-1|AAR13752.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 26.6 bits (56), Expect = 0.64
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 325 DQAPEDGLTCGTPSIRTAYPEDG*TSASSSGC 420
           DQ   D +T GT S++ +YP D  T+ +  GC
Sbjct: 98  DQFGLDFMTSGTLSLQGSYPTDHCTNDAFYGC 129


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 26.6 bits (56), Expect = 0.64
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 325 DQAPEDGLTCGTPSIRTAYPEDG*TSASSSGC 420
           DQ   D +T GT S++ +YP D  T+ +  GC
Sbjct: 116 DQFGLDFMTSGTLSLQGSYPTDHCTNDAFYGC 147


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 26.6 bits (56), Expect = 0.64
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 325 DQAPEDGLTCGTPSIRTAYPEDG*TSASSSGC 420
           DQ   D +T GT S++ +YP D  T+ +  GC
Sbjct: 116 DQFGLDFMTSGTLSLQGSYPTDHCTNDAFYGC 147


>AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismutase
           2 protein.
          Length = 211

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +3

Query: 444 PTRHQFYLHAKLDLTEG 494
           P +H F++H K DLT+G
Sbjct: 59  PGKHGFHIHEKGDLTDG 75


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +1

Query: 403 ASSSGCPLTCSSTNRRGISSTCTP 474
           A +S CP+ CSS   R  S  C P
Sbjct: 57  AQASTCPVPCSSIWSRPSSMRCAP 80


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 10/20 (50%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = +1

Query: 565 TAPQKCHPPIS-TKSATNRT 621
           T+ Q+CHPP++ T  A N T
Sbjct: 342 TSSQQCHPPVNDTLEAPNST 361


>DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.
          Length = 353

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 516 EVARRIVAYIAQAETGDCTPEM 581
           ++AR+   Y +  E G+ TPE+
Sbjct: 101 DIARQFFTYASATEEGELTPEL 122


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -2

Query: 245 TNRIWVHQDFQDHRIR 198
           T  IW+  ++QDH+ +
Sbjct: 83  TTNIWLEHEWQDHKFK 98


>AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.
          Length = 391

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +1

Query: 181 CG*SVNLIL*SWKSWWTQMRLVKSALRRYARN 276
           CG  V  +L S K W +  +  K  L +Y  N
Sbjct: 35  CGLKVGRLLDSVKGWLSVSQQEKCPLNKYCEN 66


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 218 NLGGPKCDWSRV 253
           N+GGPK  W R+
Sbjct: 742 NIGGPKSSWRRL 753


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 679,564
Number of Sequences: 2352
Number of extensions: 14012
Number of successful extensions: 56
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)