Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG1027
(624 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80955-5|AAG01559.2| 573|Caenorhabditis elegans Ferm domain (pr... 64 6e-11
U80955-4|ABB51180.1| 589|Caenorhabditis elegans Ferm domain (pr... 64 6e-11
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr... 62 2e-10
Z48241-7|CAA88287.1| 1026|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z36237-3|CAA85272.1| 1026|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z82096-3|CAD45613.1| 548|Caenorhabditis elegans Hypothetical pr... 30 1.5
AC006816-3|AAK85510.3| 508|Caenorhabditis elegans Hypothetical ... 29 2.0
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 28 6.2
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 28 6.2
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 28 6.2
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 28 6.2
AC024817-29|AAK68530.1| 280|Caenorhabditis elegans C-type lecti... 28 6.2
Z92834-8|CAB07394.2| 1589|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z92834-7|CAB07385.2| 1587|Caenorhabditis elegans Hypothetical pr... 27 8.2
U33051-1|AAA85507.1| 1587|Caenorhabditis elegans sur-2 protein. 27 8.2
>U80955-5|AAG01559.2| 573|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 2,
isoform a protein.
Length = 573
Score = 64.5 bits (150), Expect = 6e-11
Identities = 45/127 (35%), Positives = 64/127 (50%), Gaps = 4/127 (3%)
Frame = +3
Query: 213 LEILVDPNAIGQECLEKVCEKLEIGAEADYFGLRVCPGSGPGRWLNLRNPLDPHRI--PG 386
L I+V NA+G E E+V L++ E DYFGL+ WL+ + P
Sbjct: 47 LNIVVPRNAVGSELYEEVFYSLDL-EERDYFGLQYTDPFNVQHWLDPTKKVAKQVAIGPP 105
Query: 387 GRLDLRVKFWV--PPHLLINEPTRHQFYLHAKLDLTEGRLVVADLEVARRIVAYIAQAET 560
L RVKF+ P L E TR+QF+L K D++ GRL ++A + A+ Q+E
Sbjct: 106 FTLRFRVKFFTSEPSSNLKEELTRYQFFLQIKQDISSGRLQCPH-QLAIELAAFALQSEL 164
Query: 561 GDCTPEM 581
GD PE+
Sbjct: 165 GDYNPEL 171
>U80955-4|ABB51180.1| 589|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 2,
isoform b protein.
Length = 589
Score = 64.5 bits (150), Expect = 6e-11
Identities = 45/127 (35%), Positives = 64/127 (50%), Gaps = 4/127 (3%)
Frame = +3
Query: 213 LEILVDPNAIGQECLEKVCEKLEIGAEADYFGLRVCPGSGPGRWLNLRNPLDPHRI--PG 386
L I+V NA+G E E+V L++ E DYFGL+ WL+ + P
Sbjct: 63 LNIVVPRNAVGSELYEEVFYSLDL-EERDYFGLQYTDPFNVQHWLDPTKKVAKQVAIGPP 121
Query: 387 GRLDLRVKFWV--PPHLLINEPTRHQFYLHAKLDLTEGRLVVADLEVARRIVAYIAQAET 560
L RVKF+ P L E TR+QF+L K D++ GRL ++A + A+ Q+E
Sbjct: 122 FTLRFRVKFFTSEPSSNLKEELTRYQFFLQIKQDISSGRLQCPH-QLAIELAAFALQSEL 180
Query: 561 GDCTPEM 581
GD PE+
Sbjct: 181 GDYNPEL 187
>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical
protein H05G16.1 protein.
Length = 1111
Score = 62.5 bits (145), Expect = 2e-10
Identities = 48/131 (36%), Positives = 64/131 (48%), Gaps = 5/131 (3%)
Frame = +3
Query: 222 LVDPNAIGQECLEKVCEKLEIGAEADYFGLRVCPGSGPGRWLNLRNPLDPHRIPGGRLDL 401
L+ AIGQ L++VC L + E DYFGL +G WL+ R +I G D
Sbjct: 60 LLQHKAIGQTLLDEVCRHLNL-LECDYFGLSFIDINGNHCWLD-REKTILRQITNGSTDA 117
Query: 402 R----VKFWVP-PHLLINEPTRHQFYLHAKLDLTEGRLVVADLEVARRIVAYIAQAETGD 566
+ VKF+ P P L E TR+ F + K DL G L +D A + AY+ Q+E GD
Sbjct: 118 KFYFVVKFYTPNPIDLEEEYTRYLFTMQIKRDLALGELHCSD-NTASLLSAYLVQSECGD 176
Query: 567 CTPEMPPTHIY 599
+ E P Y
Sbjct: 177 FSSEDYPDATY 187
>Z48241-7|CAA88287.1| 1026|Caenorhabditis elegans Hypothetical
protein C48D5.2a protein.
Length = 1026
Score = 59.7 bits (138), Expect = 2e-09
Identities = 46/120 (38%), Positives = 62/120 (51%), Gaps = 6/120 (5%)
Frame = +3
Query: 225 VDPNAIGQECLEKVCEKLEIGAEADYFGLRVCPGSGPG----RWLNLRNPLDPHRI-PGG 389
++ N++G LEKV LEI E DYFGL +WL+ L I P
Sbjct: 45 IEKNSLGIVLLEKVFNYLEI-IEKDYFGLVFIAVDNSSAQQKKWLDPSKNLRKQMICPPY 103
Query: 390 RLDLRVKFWV-PPHLLINEPTRHQFYLHAKLDLTEGRLVVADLEVARRIVAYIAQAETGD 566
L RVKF+V P+ L +E TR QFY + +L EGRL + +A + +Y+ QAE GD
Sbjct: 104 HLFFRVKFYVRDPNRLRDEFTRFQFYQQVRQNLEEGRLPCNEGSLA-LLASYVVQAEVGD 162
>Z36237-3|CAA85272.1| 1026|Caenorhabditis elegans Hypothetical
protein C48D5.2a protein.
Length = 1026
Score = 59.7 bits (138), Expect = 2e-09
Identities = 46/120 (38%), Positives = 62/120 (51%), Gaps = 6/120 (5%)
Frame = +3
Query: 225 VDPNAIGQECLEKVCEKLEIGAEADYFGLRVCPGSGPG----RWLNLRNPLDPHRI-PGG 389
++ N++G LEKV LEI E DYFGL +WL+ L I P
Sbjct: 45 IEKNSLGIVLLEKVFNYLEI-IEKDYFGLVFIAVDNSSAQQKKWLDPSKNLRKQMICPPY 103
Query: 390 RLDLRVKFWV-PPHLLINEPTRHQFYLHAKLDLTEGRLVVADLEVARRIVAYIAQAETGD 566
L RVKF+V P+ L +E TR QFY + +L EGRL + +A + +Y+ QAE GD
Sbjct: 104 HLFFRVKFYVRDPNRLRDEFTRFQFYQQVRQNLEEGRLPCNEGSLA-LLASYVVQAEVGD 162
>Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical
protein ZK1067.7 protein.
Length = 373
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/72 (30%), Positives = 28/72 (38%), Gaps = 5/72 (6%)
Frame = +1
Query: 274 NWRSVPRQTISVCA---CAQDQAPEDGLTCGT--PSIRTAYPEDG*TSASSSGCPLTCSS 438
N +Q IS CA CAQ + +CG P I P+ + S C TC +
Sbjct: 104 NCNQCQQQCISSCATPICAQSCNNQCSSSCGNSAPQIVVLQPQQNQCGSCQSSCQQTCPT 163
Query: 439 TNRRGISSTCTP 474
N S C P
Sbjct: 164 CN---CQSACAP 172
>Z82096-3|CAD45613.1| 548|Caenorhabditis elegans Hypothetical
protein ZK909.2c protein.
Length = 548
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -3
Query: 373 CGSRGFRKLSHLPGPDPGHTRRPK*SASAPISNFSH 266
CGS+ ++ G D + R+P S SAP+S H
Sbjct: 192 CGSKDDTDAENMEGLDDDYLRQPTTSTSAPVSPIDH 227
>AC006816-3|AAK85510.3| 508|Caenorhabditis elegans Hypothetical
protein Y71D11A.5 protein.
Length = 508
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 372 HRIPGGRLDLRVKFWVPPHLLINEPT 449
H+IPGG++D+ V+ WV I++ T
Sbjct: 80 HKIPGGQVDVEVEVWVQEITTISDIT 105
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +1
Query: 298 TISVCACAQDQAPEDGLTCGTPSIRTAYPEDG*TSASSSGCPLTCSSTNRRGISS 462
T++V C+ A G + G PS A DG S ++ G P+ N + S
Sbjct: 1204 TVTVSVCSPSGASCSGYSTGGPSTPVACNSDGTGSPATIGSPVPQDLVNNDRVRS 1258
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +1
Query: 298 TISVCACAQDQAPEDGLTCGTPSIRTAYPEDG*TSASSSGCPLTCSSTNRRGISS 462
T++V C+ A G + G PS A DG S ++ G P+ N + S
Sbjct: 1217 TVTVSVCSPSGASCSGYSTGGPSTPVACNSDGTGSPATIGSPVPQDLVNNDRVRS 1271
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +1
Query: 298 TISVCACAQDQAPEDGLTCGTPSIRTAYPEDG*TSASSSGCPLTCSSTNRRGISS 462
T++V C+ A G + G PS A DG S ++ G P+ N + S
Sbjct: 1205 TVTVSVCSPSGASCSGYSTGGPSTPVACNSDGTGSPATIGSPVPQDLVNNDRVRS 1259
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +1
Query: 298 TISVCACAQDQAPEDGLTCGTPSIRTAYPEDG*TSASSSGCPLTCSSTNRRGISS 462
T++V C+ A G + G PS A DG S ++ G P+ N + S
Sbjct: 1217 TVTVSVCSPSGASCSGYSTGGPSTPVACNSDGTGSPATIGSPVPQDLVNNDRVRS 1271
>AC024817-29|AAK68530.1| 280|Caenorhabditis elegans C-type lectin
protein 85 protein.
Length = 280
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 334 PEDGLTCGTPSIRTAYPEDG*TSASSSGCPLTCSS 438
P +T S T YP G T S+SG P++ S+
Sbjct: 246 PASSMTDSPASGATGYPASGATDYSASGAPVSAST 280
>Z92834-8|CAB07394.2| 1589|Caenorhabditis elegans Hypothetical protein
F39B2.4b protein.
Length = 1589
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +1
Query: 217 KSWWTQMRLVKSALRRYARNW 279
K W +RLV LRRY NW
Sbjct: 1274 KDLWYTLRLVMPYLRRYYENW 1294
>Z92834-7|CAB07385.2| 1587|Caenorhabditis elegans Hypothetical protein
F39B2.4a protein.
Length = 1587
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +1
Query: 217 KSWWTQMRLVKSALRRYARNW 279
K W +RLV LRRY NW
Sbjct: 1272 KDLWYTLRLVMPYLRRYYENW 1292
>U33051-1|AAA85507.1| 1587|Caenorhabditis elegans sur-2 protein.
Length = 1587
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +1
Query: 217 KSWWTQMRLVKSALRRYARNW 279
K W +RLV LRRY NW
Sbjct: 1272 KDLWYTLRLVMPYLRRYYENW 1292
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,867,271
Number of Sequences: 27780
Number of extensions: 321056
Number of successful extensions: 915
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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