Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1026
         (455 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094648-1|AAM11001.2|  375|Drosophila melanogaster AT09463p pro...    52   3e-07
AE014297-2718|AAF55706.1|  181|Drosophila melanogaster CG4686-PA...    52   4e-07
X99510-1|CAA67860.1|  317|Drosophila melanogaster CDK4/6 kinase ...    31   0.56 
AY060397-1|AAL25436.1|  317|Drosophila melanogaster LD31205p pro...    31   0.56 
AE013599-2311|AAM68505.1|  317|Drosophila melanogaster CG5072-PC...    31   0.56 
AE013599-2310|AAF57981.1|  317|Drosophila melanogaster CG5072-PB...    31   0.56 
AE013599-2309|AAF57980.1|  317|Drosophila melanogaster CG5072-PA...    31   0.56 
AE014134-1728|AAF52832.2|  659|Drosophila melanogaster CG31711-P...    29   3.9  

>AY094648-1|AAM11001.2|  375|Drosophila melanogaster AT09463p
           protein.
          Length = 375

 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 11/122 (9%)
 Frame = +2

Query: 122 LMINTVTEGTMSLLRTIGIF-KSSSVDKPPTTIMIRA--------PLWQLAQEAGPFVRL 274
           +++ ++ +   +LLRT+G+  K   V +    ++  A         L++LA     F+RL
Sbjct: 209 MLMASMVDYVFALLRTLGLRPKKVPVQETSMAVLPAAHSYAHSHGSLYRLAGCHYHFIRL 268

Query: 275 AGLSGAAAVILGAMGAHRTFPETEAKD--DLKKIFETANRFHFLHTLALVTVPLCRRPYI 448
           AG+ GA+A+ +GA   +     ++ K+  D +   + ANR HFLH+ A++ +PL   P  
Sbjct: 269 AGIVGASAIFMGAYCKYVLKDVSDPKEQVDSQAFADVANRIHFLHSFAMMAMPLAHYPVF 328

Query: 449 AG 454
            G
Sbjct: 329 TG 330


>AE014297-2718|AAF55706.1|  181|Drosophila melanogaster CG4686-PA
           protein.
          Length = 181

 Score = 52.0 bits (119), Expect = 4e-07
 Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
 Frame = +2

Query: 137 VTEGTMSLLRTIGIF-KSSSVDKPPTTIMIRA--------PLWQLAQEAGPFVRLAGLSG 289
           V     +LLRT+G+  K   V +    ++  A         L++LA     F+RLAG+ G
Sbjct: 20  VASSASALLRTLGLRPKKVPVQETSMAVLPAAHSYAHSHGSLYRLAGCHYHFIRLAGIVG 79

Query: 290 AAAVILGAMGAHRTFPETEAKD--DLKKIFETANRFHFLHTLALVTVPLCRRPYIAG 454
           A+A+ +GA   +     ++ K+  D +   + ANR HFLH+ A++ +PL   P   G
Sbjct: 80  ASAIFMGAYCKYVLKDVSDPKEQVDSQAFADVANRIHFLHSFAMMAMPLAHYPVFTG 136


>X99510-1|CAA67860.1|  317|Drosophila melanogaster CDK4/6 kinase
           protein.
          Length = 317

 Score = 31.5 bits (68), Expect = 0.56
 Identities = 20/59 (33%), Positives = 26/59 (44%)
 Frame = +2

Query: 212 TIMIRAPLWQLAQEAGPFVRLAGLSGAAAVILGAMGAHRTFPETEAKDDLKKIFETANR 388
           T+  RAP   LAQ   P+     +  AA +I         FP T  K+ L +IFE   R
Sbjct: 194 TLWYRAPEVLLAQ---PYNSTVDIWSAACIIFEMFNRRALFPGTSEKNQLDRIFELTGR 249


>AY060397-1|AAL25436.1|  317|Drosophila melanogaster LD31205p
           protein.
          Length = 317

 Score = 31.5 bits (68), Expect = 0.56
 Identities = 20/59 (33%), Positives = 26/59 (44%)
 Frame = +2

Query: 212 TIMIRAPLWQLAQEAGPFVRLAGLSGAAAVILGAMGAHRTFPETEAKDDLKKIFETANR 388
           T+  RAP   LAQ   P+     +  AA +I         FP T  K+ L +IFE   R
Sbjct: 194 TLWYRAPEVLLAQ---PYNSTVDIWSAACIIFEMFNRRALFPGTSEKNQLDRIFELTGR 249


>AE013599-2311|AAM68505.1|  317|Drosophila melanogaster CG5072-PC,
           isoform C protein.
          Length = 317

 Score = 31.5 bits (68), Expect = 0.56
 Identities = 20/59 (33%), Positives = 26/59 (44%)
 Frame = +2

Query: 212 TIMIRAPLWQLAQEAGPFVRLAGLSGAAAVILGAMGAHRTFPETEAKDDLKKIFETANR 388
           T+  RAP   LAQ   P+     +  AA +I         FP T  K+ L +IFE   R
Sbjct: 194 TLWYRAPEVLLAQ---PYNSTVDIWSAACIIFEMFNRRALFPGTSEKNQLDRIFELTGR 249


>AE013599-2310|AAF57981.1|  317|Drosophila melanogaster CG5072-PB,
           isoform B protein.
          Length = 317

 Score = 31.5 bits (68), Expect = 0.56
 Identities = 20/59 (33%), Positives = 26/59 (44%)
 Frame = +2

Query: 212 TIMIRAPLWQLAQEAGPFVRLAGLSGAAAVILGAMGAHRTFPETEAKDDLKKIFETANR 388
           T+  RAP   LAQ   P+     +  AA +I         FP T  K+ L +IFE   R
Sbjct: 194 TLWYRAPEVLLAQ---PYNSTVDIWSAACIIFEMFNRRALFPGTSEKNQLDRIFELTGR 249


>AE013599-2309|AAF57980.1|  317|Drosophila melanogaster CG5072-PA,
           isoform A protein.
          Length = 317

 Score = 31.5 bits (68), Expect = 0.56
 Identities = 20/59 (33%), Positives = 26/59 (44%)
 Frame = +2

Query: 212 TIMIRAPLWQLAQEAGPFVRLAGLSGAAAVILGAMGAHRTFPETEAKDDLKKIFETANR 388
           T+  RAP   LAQ   P+     +  AA +I         FP T  K+ L +IFE   R
Sbjct: 194 TLWYRAPEVLLAQ---PYNSTVDIWSAACIIFEMFNRRALFPGTSEKNQLDRIFELTGR 249


>AE014134-1728|AAF52832.2|  659|Drosophila melanogaster CG31711-PA
           protein.
          Length = 659

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +2

Query: 164 RTIGIFKSSSVDKPPTTIMIRAPLWQLAQEAGPF-VRLAGLSGAAAVI 304
           +   +F   S  + P ++++R P  QL  E  P  +RL+G S AAA +
Sbjct: 500 KVYNVFSKVSASQAPPSLIVRQP--QLQPEVAPAPMRLSGRSRAAAAV 545


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,434,903
Number of Sequences: 53049
Number of extensions: 333758
Number of successful extensions: 671
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1497419784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)