Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1026
         (455 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032631-16|CAB63338.2|  156|Caenorhabditis elegans Hypothetical...    61   4e-10
AF026201-1|AAB71239.1|  113|Caenorhabditis elegans Hypothetical ...    29   2.1  
Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr...    27   6.5  
AC024771-1|AAK70658.2|  315|Caenorhabditis elegans Serpentine re...    27   6.5  

>AL032631-16|CAB63338.2|  156|Caenorhabditis elegans Hypothetical
           protein Y106G6H.8 protein.
          Length = 156

 Score = 60.9 bits (141), Expect = 4e-10
 Identities = 27/66 (40%), Positives = 40/66 (60%)
 Frame = +2

Query: 251 EAGPFVRLAGLSGAAAVILGAMGAHRTFPETEAKDDLKKIFETANRFHFLHTLALVTVPL 430
           +  P +RLAGLSGA A+ LGA G+H         +  +  F+TA+R+H +H+LAL+  P 
Sbjct: 44  DMSPIIRLAGLSGAVAISLGAYGSHVLRDNPSIDERRRTAFDTASRYHLIHSLALLASPA 103

Query: 431 CRRPYI 448
            R P +
Sbjct: 104 ARFPLV 109


>AF026201-1|AAB71239.1|  113|Caenorhabditis elegans Hypothetical
           protein D1079.1 protein.
          Length = 113

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 15/44 (34%), Positives = 26/44 (59%)
 Frame = -3

Query: 228 ALIIMVVGGLSTELDLKIPMVRNKLIVPSVTVLIINASIQLTIP 97
           AL I   G LS  ++ KI  + N ++  +V  L+++  +QL+IP
Sbjct: 48  ALYIHCFGLLSISVEYKIAFLYNFVMDSNVVTLVMSRIVQLSIP 91


>Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical
           protein C06B8.7 protein.
          Length = 3118

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -2

Query: 79  FNMRTEIRVNLVFDKFIH*SPRA 11
           FN + EIR N VFD F    PR+
Sbjct: 830 FNQQNEIRANTVFDPFPSLPPRS 852


>AC024771-1|AAK70658.2|  315|Caenorhabditis elegans Serpentine
           receptor, class ab (class a-like) protein 23 protein.
          Length = 315

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
 Frame = +2

Query: 131 NTVTEGTMSLLRTIGIFKSSSVDKPPTTIMIRA----PLWQLAQEAGPF 265
           NT+   T+S++ T   F SSS+ KP    ++ A    PL+ +A   G +
Sbjct: 253 NTLVFATLSVVTTTLHFNSSSLSKPNYIALVEAVHILPLYGIAVSVGVY 301


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,395,511
Number of Sequences: 27780
Number of extensions: 167645
Number of successful extensions: 389
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 385
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)