Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1024
         (528 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    25   0.63 
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    25   0.63 
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    24   0.84 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    24   0.84 
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   3.4  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 24.6 bits (51), Expect = 0.63
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 524 VEYKNIQVQQENSFWNV 474
           V+ K I VQQ NS+W +
Sbjct: 326 VDAKTISVQQWNSYWGI 342


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 24.6 bits (51), Expect = 0.63
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 524 VEYKNIQVQQENSFWNV 474
           V+ K I VQQ NS+W +
Sbjct: 326 VDAKTISVQQWNSYWGI 342


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 24.2 bits (50), Expect = 0.84
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 171 FSGQLHSVKFVSRCARIVKFHSHQFFITRLKKYNFKKNK 55
           +   L +V F+      VKF  H   + R +  NF+K++
Sbjct: 371 YKNYLLNVSFIDAAGSEVKFDEHGDGLARYEILNFRKSE 409


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 24.2 bits (50), Expect = 0.84
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 171 FSGQLHSVKFVSRCARIVKFHSHQFFITRLKKYNFKKNK 55
           +   L +V F+      VKF  H   + R +  NF+K++
Sbjct: 461 YKNYLLNVSFIDAAGSEVKFDEHGDGLARYEILNFRKSE 499


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 390 LYFIFIKFISFFHLNFN 340
           + F+ I+F SF  LNFN
Sbjct: 134 IIFLLIRFKSFSLLNFN 150


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,534
Number of Sequences: 438
Number of extensions: 2851
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14845611
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)