Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1024
         (528 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g29810.1 68416.m03794 phytochelatin synthetase family protein...    30   1.1  
At3g04080.1 68416.m00432 apyrase (APY1) identical to apyrase (At...    29   2.6  
At5g59020.1 68418.m07393 expressed protein                             28   3.4  
At3g02210.1 68416.m00202 phytochelatin synthetase family protein...    28   3.4  
At1g15210.1 68414.m01818 ABC transporter family protein Similar ...    28   3.4  
At5g40060.1 68418.m04860 disease resistance protein (TIR-NBS-LRR...    27   5.9  
At3g21170.1 68416.m02674 F-box family protein contains Pfam prof...    27   5.9  
At5g38000.1 68418.m04576 NADP-dependent oxidoreductase, putative...    27   7.8  

>At3g29810.1 68416.m03794 phytochelatin synthetase family protein /
           COBRA cell expansion protein COBL2 similar to
           phytochelatin synthetase [Hordeum vulgare subsp.
           vulgare] GI:29570314; identified in Roudier, et al,
           Plant Phys. (2002) 130:538-548 (PMID:12376623); contains
           Pfam profile PF04833: Phytochelatin synthetase-like
           conserved region
          Length = 441

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 20/65 (30%), Positives = 29/65 (44%)
 Frame = -1

Query: 459 PLLHSTIYIFKKRVRVLMYARKKLYFIFIKFISFFHLNFNQFEKKSITQHPQTRILASLF 280
           PLL  T ++   RV   +    K Y+     I+ F+ N N  +   + QHP    L  LF
Sbjct: 275 PLLQCTQHMCPIRVHWHVKTSYKEYWRVKVAITNFNYNMNYSQWNLVVQHPNFDNLTKLF 334

Query: 279 LTSYK 265
             +YK
Sbjct: 335 SFNYK 339


>At3g04080.1 68416.m00432 apyrase (APY1) identical to apyrase
           (Atapy1) GI:6002631 from [Arabidopsis thaliana]
          Length = 471

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 12/61 (19%), Positives = 31/61 (50%)
 Frame = -1

Query: 408 MYARKKLYFIFIKFISFFHLNFNQFEKKSITQHPQTRILASLFLTSYKFGNSRYGSESSP 229
           MY + + YF+++     + L   + E   +++      +A+ +  +YK+G   + + +SP
Sbjct: 255 MYLKGRKYFLYVHSYLHYGLLAARAEILKVSEDSNNPCIATGYAGTYKYGGKAFKAAASP 314

Query: 228 A 226
           +
Sbjct: 315 S 315


>At5g59020.1 68418.m07393 expressed protein
          Length = 780

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = -1

Query: 306 QTRILASLFLTSYKFGNSRYGSESSPAAIFRLAKTKLRRSYCNERFSGQLHSV 148
           +T I+A+   T  K G+S  G  +S    F +   K    + N+R SGQ H +
Sbjct: 476 ETDIIAA---TQKKMGSSEEGECTSVYTFFSIKDHKRNSGWLNQRGSGQTHGL 525


>At3g02210.1 68416.m00202 phytochelatin synthetase family protein /
           COBRA cell expansion protein COBL3 similar to
           phytochelatin synthetase [Hordeum vulgare subsp.
           vulgare] GI:29570314; identified in Roudier, et al,
           Plant Phys. (2002) 130:538-548 (PMID:12376623);
           supported by cDNA: gi|26452134|dbj|AK118555.1; contains
           Pfam profile PF04833: Phytochelatin synthetase-like
           conserved region
          Length = 452

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 19/70 (27%), Positives = 30/70 (42%)
 Frame = -1

Query: 474 NAINWPLLHSTIYIFKKRVRVLMYARKKLYFIFIKFISFFHLNFNQFEKKSITQHPQTRI 295
           NA   PL+  T ++   R+   +    K Y+     I+ F+ N N  +   + QHP    
Sbjct: 279 NAYIPPLVQCTKHMCPVRIHWHVKVNYKQYWRVKVTITNFNYNMNYSQWNLVVQHPNFDN 338

Query: 294 LASLFLTSYK 265
           L   F  +YK
Sbjct: 339 LTQTFSFNYK 348


>At1g15210.1 68414.m01818 ABC transporter family protein Similar to
            gb|Z70524 GI:1514643 PDR5-like ABC transporter from
            Spirodela polyrrhiza and is a member of the PF|00005 ABC
            transporter family. ESTs gb|N97039 and gb|T43169 come
            from this gene
          Length = 1442

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
 Frame = -1

Query: 456  LLHSTIY--IFKKRVRVLMYARKKLYFIFIKFISFFHLNFNQFEKKSITQHPQTRILASL 283
            L+ +T Y  I    V     A K L+FIFI + SF +  +      S+T + Q   +AS+
Sbjct: 1276 LIQTTYYSLIIYSMVGFEWKASKFLWFIFINYFSFLYWTYYGMMTVSLTPNQQ---VASI 1332

Query: 282  FLTSY 268
            F +++
Sbjct: 1333 FASAF 1337


>At5g40060.1 68418.m04860 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein. False intron
           created at intron 2 to escape a frameshift in the BAC
           sequence.
          Length = 1165

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +2

Query: 398 RAYISTRTL-FLNIYMVLCRSGQFIALHSKMNF 493
           +A+   R L FLNIY     SGQ I LH   NF
Sbjct: 551 KAFQGMRNLRFLNIYTKALMSGQKIRLHLPENF 583


>At3g21170.1 68416.m02674 F-box family protein contains Pfam
           profile: PF00646 F-box domain
          Length = 394

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -1

Query: 294 LASLFLTSYKFGNSRYGSESSPAAIFRLAKTKLRR 190
           ++  FL S+ F   R+GSES P     LA +  R+
Sbjct: 233 ISEQFLLSFDFSTERFGSESLPEGDSHLALSVTRQ 267


>At5g38000.1 68418.m04576 NADP-dependent oxidoreductase, putative
           similar to probable NADP-dependent oxidoreductase
           (zeta-crystallin homolog) P1 [SP|Q39172][gi:886428] and
           P2 [SP|Q39173][gi:886430], Arabidopsis thaliana
          Length = 353

 Score = 27.1 bits (57), Expect = 7.8
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -1

Query: 456 LLHSTIYIFKKRVRVLMYARKKLYFIFIKFISF 358
           +LH+T  I  KR+RV  +A  + +  + KF+ F
Sbjct: 275 VLHNTATIVHKRIRVQGFAAVEFFDRYSKFLDF 307


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,893,756
Number of Sequences: 28952
Number of extensions: 175299
Number of successful extensions: 398
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 398
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 977150592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)