Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG1023
(686 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC839.06 |cta3||P-type ATPase, calcium transporting Cta3|Schiz... 80 3e-16
SPBC31E1.02c |pmr1||P-type ATPase, calcium transporting Pmr1 |Sc... 79 6e-16
SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2 |Schizo... 76 4e-15
SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyc... 65 1e-11
SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pm... 45 9e-06
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 32 0.068
SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 28 1.5
SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces... 27 1.9
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 27 1.9
SPAC22G7.10 |||mRNA cleavage and polyadenylation specificity fac... 27 2.5
SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|... 27 3.4
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 27 3.4
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 27 3.4
SPAC11E3.07 |vma4||V-type ATPase subunit E|Schizosaccharomyces p... 26 4.4
SPAC6C3.06c |||P-type ATPase, calcium transporting|Schizosacchar... 26 5.9
SPCC285.17 |spp27|uaf30|RNA polymerase I upstream activation fac... 26 5.9
>SPBC839.06 |cta3||P-type ATPase, calcium transporting
Cta3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1037
Score = 80.2 bits (189), Expect = 3e-16
Identities = 52/176 (29%), Positives = 87/176 (49%)
Frame = +3
Query: 159 VEEVLKYFGTDPDKGLSPDQIKRNQEKYGPNELPTEEGKSIWQLVLEQFDDLLVKXXXXX 338
+++V F T GL+ ++ + +YG N L + G S W+++L Q + +
Sbjct: 15 IKDVESEFLTSIPNGLTHEEAQNRLSEYGENRLEADSGVSAWKVLLRQVLNAMCVVLILA 74
Query: 339 XXXSFVLALFEEHEDAFSAFVEPFVILLILIANAVVGVWQERNAESAIEALKEYEPEMGK 518
SF + ++E VI I++ N VG QE AE +++L+ M
Sbjct: 75 AALSF----------GTTDWIEGGVISAIIVLNITVGFIQEYKAEKTMDSLRTLASPMAH 124
Query: 519 VIRGDKSGVQKIRAKEIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGES 686
V R K+ I + +VPGDVV + GD +PAD+RL++ + D+++LTGES
Sbjct: 125 VTRSSKTDA--IDSHLLVPGDVVVLKTGDVVPADLRLVE--TVNFETDEALLTGES 176
>SPBC31E1.02c |pmr1||P-type ATPase, calcium transporting Pmr1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 899
Score = 79.0 bits (186), Expect = 6e-16
Identities = 59/179 (32%), Positives = 94/179 (52%), Gaps = 2/179 (1%)
Frame = +3
Query: 156 SVEEVLKYFGTDPDKGLSP-DQIKRNQEKYGPNELPTEEGKSIWQLVLEQF-DDLLVKXX 329
SVE+ TD GLS +I R + +G N+L E+ +++ L+QF D L+
Sbjct: 9 SVEQTCADLETDMYNGLSSLQEITRRNKVHGDNDLKVEDEENMVVQFLKQFVKDPLILLL 68
Query: 330 XXXXXXSFVLALFEEHEDAFSAFVEPFVILLILIANAVVGVWQERNAESAIEALKEYEPE 509
S L + DA S I L ++ VG QE +E +++AL P
Sbjct: 69 FASSAISVTLGNID---DAIS-------IALAIVIVVTVGFVQEYRSEQSLKALNNLVPH 118
Query: 510 MGKVIRGDKSGVQKIRAKEIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGES 686
VIR K+ + I A ++VPGD+V + +GD++PAD+R+++ +T + ID+S LTGE+
Sbjct: 119 YCNVIRSGKT--EHIVASKLVPGDLVILQIGDRVPADLRIVE--ATELEIDESNLTGEN 173
>SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1010
Score = 76.2 bits (179), Expect = 4e-15
Identities = 58/175 (33%), Positives = 91/175 (52%)
Frame = +3
Query: 162 EEVLKYFGTDPDKGLSPDQIKRNQEKYGPNELPTEEGKSIWQLVLEQFDDLLVKXXXXXX 341
EE+L+ TDP GL+ +++ ++KYG N++ E+ +I ++F V
Sbjct: 163 EELLE---TDPKYGLTESEVEERKKKYGLNQMKEEKTNNI-----KKFLSFFV------G 208
Query: 342 XXSFVLALFEEHEDAFSAFVEPFVILLILIANAVVGVWQERNAESAIEALKEYEPEMGKV 521
FV+ L +V+ VI +L+ NA VG QE A S ++ LK+ V
Sbjct: 209 PIQFVMELAAALAAGLRDWVDFGVICALLLLNATVGFVQEYQAGSIVDELKKTMALKASV 268
Query: 522 IRGDKSGVQKIRAKEIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGES 686
+R + V++I A EIVPGD++ + G PAD RLI +++DQS +TGES
Sbjct: 269 LRDGR--VKEIEASEIVPGDILHLDEGTICPADGRLI-TKDCFLQVDQSAITGES 320
>SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 919
Score = 64.9 bits (151), Expect = 1e-11
Identities = 51/175 (29%), Positives = 88/175 (50%)
Frame = +3
Query: 162 EEVLKYFGTDPDKGLSPDQIKRNQEKYGPNELPTEEGKSIWQLVLEQFDDLLVKXXXXXX 341
EE+L+ TD + GL+ +++ ++KYG N++ E + ++
Sbjct: 75 EELLQ---TDMNTGLTMSEVEERRKKYGLNQMKEELENPFLKFIM-----------FFVG 120
Query: 342 XXSFVLALFEEHEDAFSAFVEPFVILLILIANAVVGVWQERNAESAIEALKEYEPEMGKV 521
FV+ + +V+ VI +L+ NAVVG QE A S ++ LK+ V
Sbjct: 121 PIQFVMEMAAALAAGLRDWVDFGVICALLMLNAVVGFVQEYQAGSIVDELKKSLALKAVV 180
Query: 522 IRGDKSGVQKIRAKEIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGES 686
IR + V ++ A E+VPGD++++ G I AD R++ +++DQS +TGES
Sbjct: 181 IR--EGQVHELEANEVVPGDILKLDEGTIICADGRVV-TPDVHLQVDQSAITGES 232
>SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pmc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1292
Score = 45.2 bits (102), Expect = 9e-06
Identities = 48/202 (23%), Positives = 81/202 (40%), Gaps = 12/202 (5%)
Frame = +3
Query: 117 QHSNSTMEDAHTKSVEEVLKYFGTDPDKGLSPDQIKRNQEKYGPNELPTEEGKSIWQLVL 296
Q S+ +D++ K V + + D + + YG N LP + K + +L+L
Sbjct: 171 QMSDILNDDSNPKLVVHLDRIRSQDNNPEAKVSHDSDRVKYYGKNVLPEHDSKGLIRLML 230
Query: 297 EQFDDLLVKXXXXXXXXSFVLALFEEHE-----DAFSAFVEPFV-------ILLILIANA 440
E F D ++ S L L++ D + EP V I+ ++
Sbjct: 231 EAFKDKVLILLSIAAVVSLALGLYQTFGQPPTLDPITGKPEPRVEWVEGVAIMAAIVIVV 290
Query: 441 VVGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKIRAKEIVPGDVVEVSVGDKIPAD 620
VG + E + L + D V ++V GDV+ V GD +P D
Sbjct: 291 TVGGVNDWQKELQFKKLNAKVSNFDVQVLRD-GAVHSTSVFDLVVGDVLFVEAGDVVPVD 349
Query: 621 IRLIKIYSTTIRIDQSILTGES 686
LI+ S + +D+S +TGE+
Sbjct: 350 GVLIE--SNNLVLDESAMTGET 369
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 32.3 bits (70), Expect = 0.068
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = -2
Query: 532 SPLMTLPISGSYSFKASMADSAFLSCHTPTTALAIRISKITK-GSTKAENASSCSSNKAN 356
S + + P+S + S A+ A S LS TTA + + ++ ST A +ASS N
Sbjct: 418 SSVSSTPLSSANSTTATSASSTPLSSVNSTTATSASSTPLSSVNSTTATSASSTPLTSVN 477
Query: 355 TNEIIAANSKILTKRSS 305
+ +A+S LT +S
Sbjct: 478 STTATSASSTPLTSVNS 494
>SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1096
Score = 27.9 bits (59), Expect = 1.5
Identities = 24/91 (26%), Positives = 48/91 (52%)
Frame = +3
Query: 414 ILLILIANAVVGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKIRAKEIVPGDVVEV 593
I+ I + + V + + +E+ I ++ P+ VIR Q + A ++V GD++
Sbjct: 226 IVFISSYSIFLSVKESKESENRIHSIIG-APQPVTVIRNQVK--QTVLADDLVIGDLLYF 282
Query: 594 SVGDKIPADIRLIKIYSTTIRIDQSILTGES 686
S D + I ++S++ +D+S++TGES
Sbjct: 283 SNLDLKTCPVDGI-LFSSSCLLDESMVTGES 312
>SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 745
Score = 27.5 bits (58), Expect = 1.9
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 164 FHGFRVSVLHGGITMLPSVRFTYSLVPVT 78
F F ++ L GG+T LP + F Y L T
Sbjct: 2 FFAFLITYLLGGVTFLPFILFIYLLTRPT 30
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 27.5 bits (58), Expect = 1.9
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +3
Query: 480 IEALKEYEPEMGKVIRGDKSGVQKIRAKEIVPGDVVEVSVGDKIPAD 620
I++LK + E+ + +G + G+ EIV GD ++ V + P D
Sbjct: 639 IDSLKHLKEEVTSIKKGRECGILLKNFDEIVTGDKLQTFVEEYKPPD 685
>SPAC22G7.10 |||mRNA cleavage and polyadenylation specificity factor
complex subunit, Fip1 homolog |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 344
Score = 27.1 bits (57), Expect = 2.5
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +3
Query: 255 LPTEEGKSIWQLVLEQFDD 311
+PT +GK+I+++ LE FDD
Sbjct: 110 VPTIDGKNIFEIDLESFDD 128
>SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1402
Score = 26.6 bits (56), Expect = 3.4
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +3
Query: 561 KEIVPGDVVEVSVGDKIPADIRLI 632
K++ GD V+V D+IPADI +I
Sbjct: 295 KDVRVGDFVKVMDNDEIPADIVII 318
>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1367
Score = 26.6 bits (56), Expect = 3.4
Identities = 9/29 (31%), Positives = 20/29 (68%)
Frame = +3
Query: 546 QKIRAKEIVPGDVVEVSVGDKIPADIRLI 632
+++ K ++ GD+V+V + IPAD+ ++
Sbjct: 320 ERVCRKSLLVGDIVKVLADEAIPADLLIL 348
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 26.6 bits (56), Expect = 3.4
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +3
Query: 75 TSYRDQAISETN*RQHSNSTMEDAHTKSVEEVLKYFGTDPDKG 203
T+ QA+ + R ++ T + +S ++L+YF T+PD G
Sbjct: 456 TTPEQQAVWDVFQRIYTRFTGSEGSKESFIKLLEYFVTEPDNG 498
>SPAC11E3.07 |vma4||V-type ATPase subunit E|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 227
Score = 26.2 bits (55), Expect = 4.4
Identities = 21/91 (23%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Frame = +3
Query: 369 EEHEDAFSAFVEPFVILLILIANAVVGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQ 548
E+ +DA++ F+ ++ + + VG+ R ++ E +K P+ +V++ +
Sbjct: 106 EQKKDAYTKFMADLIVQAMELLGEPVGIVYSRQRDA--EIVKAAIPKATEVLKSKNGSID 163
Query: 549 -KIRAK------EIVPGDVVEVSVGDKIPAD 620
++ A+ + V G VV V +G KI D
Sbjct: 164 YELDAETDDFLNDSVLGGVVLVGLGGKIRVD 194
>SPAC6C3.06c |||P-type ATPase, calcium
transporting|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1033
Score = 25.8 bits (54), Expect = 5.9
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +3
Query: 558 AKEIVPGDVVEVSVGDKIPADIRLIKI---YSTTIRIDQSILTGES 686
A+ I GDVV ++ +IPAD+ L++ IR DQ L GE+
Sbjct: 184 AQNIQAGDVVYIAKDQRIPADMILLETTVGNEAFIRTDQ--LDGET 227
>SPCC285.17 |spp27|uaf30|RNA polymerase I upstream activation factor
complex subunit Spp27|Schizosaccharomyces pombe|chr
3|||Manual
Length = 233
Score = 25.8 bits (54), Expect = 5.9
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 192 PDKGLSPDQIKRNQEKYGPNELPTEEGKSI 281
PD L Q K N+E PN+LP +E K +
Sbjct: 195 PDDQLPKPQPK-NEEPAAPNDLPKQEEKEL 223
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,701,485
Number of Sequences: 5004
Number of extensions: 54681
Number of successful extensions: 183
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 175
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 317927284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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