Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG1020
(575 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g31360.1 68415.m03831 delta 9 desaturase (ADS2) identical to ... 36 0.026
At1g06080.1 68414.m00637 delta 9 desaturase (ADS1) identical to ... 36 0.026
At3g15870.1 68416.m02007 fatty acid desaturase family protein si... 32 0.24
At3g15850.1 68416.m02005 fatty acid desaturase family protein si... 31 0.55
At1g06350.1 68414.m00671 fatty acid desaturase family protein si... 31 0.55
At1g33610.1 68414.m04160 leucine-rich repeat family protein cont... 28 3.9
At5g41180.1 68418.m05005 leucine-rich repeat protein kinase, put... 27 6.8
At4g39170.1 68417.m05547 SEC14 cytosolic factor, putative / phos... 27 6.8
At3g63470.1 68416.m07147 serine carboxypeptidase, putative simil... 27 6.8
At5g41880.1 68418.m05099 DNA primase small subunit family contai... 27 9.0
At4g17140.1 68417.m02580 pleckstrin homology (PH) domain-contain... 27 9.0
At1g61080.1 68414.m06877 proline-rich family protein 27 9.0
>At2g31360.1 68415.m03831 delta 9 desaturase (ADS2) identical to
delta 9 acyl-lipid desaturase (ADS2) GI:2970036 from
[Arabidopsis thaliana]
Length = 307
Score = 35.5 bits (78), Expect = 0.026
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +2
Query: 311 TSVFAIVLFF-LGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRNTI 487
++++ LF+ +G GIT HR +H +KV LE LL +A Q WV
Sbjct: 64 SALWVTFLFYTIGGLGITVSYHRNLAHRSFKVPKWLEYLLAYCALLAIQGDPIDWVSTHR 123
Query: 488 YRN 496
Y +
Sbjct: 124 YHH 126
>At1g06080.1 68414.m00637 delta 9 desaturase (ADS1) identical to
delta 9 acyl-lipid desaturase (ADS1) GB:BAA25180
GI:2970034 from [Arabidopsis thaliana]
Length = 305
Score = 35.5 bits (78), Expect = 0.026
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +2
Query: 323 AIVLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRNTIYRN 496
A++++ +G GIT HR +H +KV LE +A Q WV Y +
Sbjct: 67 ALIVYTVGGLGITVSYHRNLAHRSFKVPKWLEYFFAYCGLLAIQGDPIDWVSTHRYHH 124
>At3g15870.1 68416.m02007 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 292
Score = 32.3 bits (70), Expect = 0.24
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = +2
Query: 332 LFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRNTIYRN 496
L F+ IT HR SH + + LE L +AFQ WV N Y +
Sbjct: 58 LVFINGICITLSYHRNLSHRSFDLPKWLEYLFAYGGVLAFQGDPIEWVSNHRYHH 112
>At3g15850.1 68416.m02005 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 371
Score = 31.1 bits (67), Expect = 0.55
Identities = 20/63 (31%), Positives = 25/63 (39%)
Frame = +2
Query: 308 ATSVFAIVLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRNTI 487
A SV + G GIT HR SH +K+ LE L + A Q WV
Sbjct: 127 AVSVAFGLYIVTGLLGITLSFHRNLSHKAFKLPKWLEYLFAYCGAQALQGNPIDWVSTHR 186
Query: 488 YRN 496
Y +
Sbjct: 187 YHH 189
>At1g06350.1 68414.m00671 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 300
Score = 31.1 bits (67), Expect = 0.55
Identities = 25/83 (30%), Positives = 34/83 (40%)
Frame = +2
Query: 227 VMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHRLWSHNGYKVK 406
+++V+R S + I L F + K F +VLF L IT HR SH +K+
Sbjct: 31 LVDVVRASVVVIVHFLCLLAPF-NFKWEALRFGLVLFALTTLSITFSFHRNLSHRSFKIP 89
Query: 407 LPLEILLMVFNSIAFQNTIFTWV 475
LE A Q WV
Sbjct: 90 KWLEYPWAYSAVFALQGDPMDWV 112
>At1g33610.1 68414.m04160 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611
Length = 907
Score = 28.3 bits (60), Expect = 3.9
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +2
Query: 383 SHNGYKVKLPLEILLMVFNSIAFQ---NTIFTWVRNTIYRNNMYYHTDISSNVFSG 541
S N + KLPL I + +A Q N + + N I R N D+S N FSG
Sbjct: 231 SSNEFYGKLPLSIATLAPTLLALQVSQNNLSGAIPNYISRFNKLEKLDLSKNRFSG 286
>At5g41180.1 68418.m05005 leucine-rich repeat protein kinase,
putative contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 664
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 297 QQNWLHRFLLLCYSSLGTLVLQLELIVCGLIMVTKS 404
+Q WL F ++ SS+G L L + C L + +S
Sbjct: 273 RQTWLRNFEIVTGSSVGLLFLVVMFSACSLCKIKRS 308
>At4g39170.1 68417.m05547 SEC14 cytosolic factor, putative /
phosphoglyceride transfer protein, putative similar to
phosphatidylinositol transfer-like protein IV
(GI:14486707) [Lotus japonicus] and
phosphatidylinositol-phosphatidylcholine transfer
protein SEC14, Yarrowia lipolytica, PIR2:S43745;contains
Pfam PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminus
Length = 614
Score = 27.5 bits (58), Expect = 6.8
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -2
Query: 493 PINGIAYPCENGVLKSNTVEDHQQDLEGQFD 401
P++ A PC G+L S+ ++ + D E D
Sbjct: 4 PVDRFAIPCFEGILSSDEKKERKSDFENSED 34
>At3g63470.1 68416.m07147 serine carboxypeptidase, putative similar
to SP|P52711 Serine carboxypeptidase II-3 precursor (EC
3.4.16.6) Hordeum vulgare; contains Pfam profile PF0450
serine carboxypeptidase
Length = 502
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = -2
Query: 547 LSPRKYIGANVGMIIHIVPINGIAYPCENGVLKSNTVEDHQQDLEGQFDF 398
++ Y G V + H + ++ ++ G+L N V + + DL G +DF
Sbjct: 225 IAGESYAGHYVPQLAHTILLHHRSFFNLKGILIGNAVINDETDLMGMYDF 274
>At5g41880.1 68418.m05099 DNA primase small subunit family contains
Pfam profile: PF01896 DNA primase small subunit
Length = 407
Score = 27.1 bits (57), Expect = 9.0
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = -2
Query: 253 IAKTYHVHHYNFVFDGRGLGCNEFF 179
I ++VH+ +DG+ GC+E++
Sbjct: 22 IENDFNVHYLRIYYDGKHPGCDEYY 46
>At4g17140.1 68417.m02580 pleckstrin homology (PH) domain-containing
protein contains Pfam profile PF00169: PH domain
Length = 1322
Score = 27.1 bits (57), Expect = 9.0
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 326 IVLFFLGNFGITAGAHRLWSH 388
+ LFFL + G HRLW H
Sbjct: 277 LYLFFLTDAGFLRNLHRLWKH 297
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 27.1 bits (57), Expect = 9.0
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +2
Query: 65 LNNL**VDKIEI*ITKMPPNSVDKTNETEYLKDNHVDYEKLIAPQASPIKHKIV 226
LN L +DK+E TK+ VD ++ L EKL++P A P K V
Sbjct: 810 LNQL--LDKVERYFTKIKETMVDISSNCMELALKEKRDEKLVSPDAKPSLKKTV 861
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,083,964
Number of Sequences: 28952
Number of extensions: 234250
Number of successful extensions: 519
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 518
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1121903184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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