Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1019
         (623 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0127 - 955244-956278,956397-956651                               28   6.9  
06_01_0715 - 5193648-5193897,5193987-5194255,5195011-5195350,519...    27   9.2  

>07_01_0127 - 955244-956278,956397-956651
          Length = 429

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 77  KIDLEKEIGGYEFTCDIDIEGKYKVFSESPLIKNLL 184
           KIDL    G +    D+ ++GKYK   E P   +LL
Sbjct: 58  KIDLRDRFGDFNSNIDLVLKGKYKCIQE-PYSMHLL 92


>06_01_0715 -
           5193648-5193897,5193987-5194255,5195011-5195350,
           5195691-5195845,5196547-5196557,5197632-5197689,
           5197855-5198004,5198074-5198169,5198398-5198818,
           5198835-5198950,5199041-5199149,5199483-5199532,
           5200936-5201004,5201366-5201459,5201550-5201820,
           5202273-5202607,5202718-5202786,5202834-5202904
          Length = 977

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
 Frame = +2

Query: 206 EGNGKVQLEKLQISMKFPVYAQKRDDGEIYMKCDYSKIKYDYQILGKTKFYADNL-FLGE 382
           +   KVQ   L   +   ++++   +G    +C   K++    +L KTK   DN+  + +
Sbjct: 344 QSRAKVQFADLPEDLLCTIFSKIATEGCCEDQCFVKKLEAHVDLLHKTKIRWDNINAILQ 403

Query: 383 QEASKLVTTF 412
           Q + K+V  F
Sbjct: 404 QHSGKIVEEF 413


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,791,004
Number of Sequences: 37544
Number of extensions: 322072
Number of successful extensions: 814
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)