Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1019
         (623 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69787-12|CAM84810.1|  234|Caenorhabditis elegans Hypothetical p...    31   0.67 
Z69787-7|CAA93643.1|  214|Caenorhabditis elegans Hypothetical pr...    31   0.67 
Z68012-2|CAA92020.1|  408|Caenorhabditis elegans Hypothetical pr...    27   8.2  

>Z69787-12|CAM84810.1|  234|Caenorhabditis elegans Hypothetical
           protein C44C10.9b protein.
          Length = 234

 Score = 31.1 bits (67), Expect = 0.67
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +2

Query: 8   RNSARGLL-EGQAKGVKTCKFSSIKIDLEKEIGGYEFTCDIDIE 136
           +  ++G+L EG  K  K C F   + D+E +   YEF CD D+E
Sbjct: 6   QGDSKGILYEGYTKAFKQCIFE--EGDVEGKNERYEFRCDYDLE 47


>Z69787-7|CAA93643.1|  214|Caenorhabditis elegans Hypothetical
           protein C44C10.9a protein.
          Length = 214

 Score = 31.1 bits (67), Expect = 0.67
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +2

Query: 8   RNSARGLL-EGQAKGVKTCKFSSIKIDLEKEIGGYEFTCDIDIE 136
           +  ++G+L EG  K  K C F   + D+E +   YEF CD D+E
Sbjct: 6   QGDSKGILYEGYTKAFKQCIFE--EGDVEGKNERYEFRCDYDLE 47


>Z68012-2|CAA92020.1|  408|Caenorhabditis elegans Hypothetical
           protein T24D5.2 protein.
          Length = 408

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 374 LGEQEASKLVTTFLNENWKFVMDTF 448
           +GE + SK V+T   EN   VMD+F
Sbjct: 207 MGEMDLSKCVSTITAENLTVVMDSF 231


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,286,902
Number of Sequences: 27780
Number of extensions: 309011
Number of successful extensions: 866
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)