Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1019
         (623 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g45610.1 68418.m05605 expressed protein                             29   2.5  
At1g77290.1 68414.m09001 tetrachloro-p-hydroquinone reductive de...    29   2.5  
At5g42180.1 68418.m05134 peroxidase 64 (PER64) (P64) (PRXR4) ide...    28   4.4  
At3g16470.1 68416.m02101 jacalin lectin family protein contains ...    28   5.8  
At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase fa...    28   5.8  
At3g32280.1 68416.m04116 hypothetical protein                          27   7.7  
At3g22750.1 68416.m02869 protein kinase, putative similar to pro...    27   7.7  
At1g53140.1 68414.m06017 dynamin family protein low similarity t...    27   7.7  

>At5g45610.1 68418.m05605 expressed protein
          Length = 633

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = -3

Query: 468 LSKKLLPKVSMTNFQFSFKNVVTSLLASCS 379
           LSKKLL     +N+Q   KN+++ LL +CS
Sbjct: 215 LSKKLLDIWRTSNYQDPRKNLISELLLACS 244


>At1g77290.1 68414.m09001 tetrachloro-p-hydroquinone reductive
           dehalogenase-related contains similarity to
           tetrachloro-p-hydroquinone reductive dehalogenase
           GI:148689 from [Flavobacterium sp.]
          Length = 266

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = +1

Query: 151 VFRKPSYKELVGRHDRPWRR 210
           V R+PSYK+++GR+   WR+
Sbjct: 227 VRRRPSYKKVIGRYFNGWRK 246


>At5g42180.1 68418.m05134 peroxidase 64 (PER64) (P64) (PRXR4)
           identical to SP|Q43872 Peroxidase 64 precursor (EC
           1.11.1.7) (Atperox P64) (PRXR4) (ATP17a) {Arabidopsis
           thaliana}
          Length = 317

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +2

Query: 308 YSKIKYDYQILGKTKFYADNLFLGEQEASKLVTTFLNENWKF 433
           +  I Y   I GK+ F +D   L      KLV  + N N +F
Sbjct: 247 FDNIYYKMLIQGKSLFSSDESLLAVPSTKKLVAKYANSNEEF 288


>At3g16470.1 68416.m02101 jacalin lectin family protein contains
           Pfam profile: PF01419 jacalin-like lectin domain;
           similar to myrosinase-binding protein homolog
           [Arabidopsis thaliana] GI:2997767
          Length = 451

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
 Frame = +2

Query: 137 GKYKVFSESPLIKNLLGGTT---VHGEGNGKVQLEKLQISMKFPVYAQKRDDGEIYMKCD 307
           G Y + S +PL   + GG T     G   G V  +         VY  + D G +Y+K D
Sbjct: 138 GVYIIPSTTPLTPPVSGGLTKLEAQGGRGGDVWDDGGAYDNVKKVYVGQGDSGVVYVKFD 197

Query: 308 YSK 316
           Y K
Sbjct: 198 YEK 200


>At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase
           family protein similar to phosphatidylinositol 4-kinase
           type-II beta [Homo sapiens] GI:20159767; contains Pfam
           profile PF00454: Phosphatidylinositol 3- and 4-kinase
          Length = 630

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 12/51 (23%), Positives = 24/51 (47%)
 Frame = +2

Query: 188 GTTVHGEGNGKVQLEKLQISMKFPVYAQKRDDGEIYMKCDYSKIKYDYQIL 340
           G  +    N      KLQ+++ FP+       G++ +K D + ++ D  +L
Sbjct: 54  GLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLTAVRSDSPLL 104


>At3g32280.1 68416.m04116 hypothetical protein
          Length = 474

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = +2

Query: 170 IKNLLGGTTVHGEGNGKVQLEKLQISMKFPVYAQKRDDGEIYMKCDYSKIKYDY 331
           +K+++ G +  G  +GK     L + +   V  Q R D EI M  D  K  +D+
Sbjct: 172 LKHVIIGGSSGGSNSGKGLANDLYLDVNELVEVQVRSDKEINMMKDKGKTIFDF 225


>At3g22750.1 68416.m02869 protein kinase, putative similar to
           protein kinase ATMRK1 [Arabidopsis thaliana]
           gi|2351097|dbj|BAA22079
          Length = 378

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
 Frame = +3

Query: 147 KCFPKAL--L*RTCWEARPSMAKEMEK 221
           +C P AL  + + CWEA P    EME+
Sbjct: 318 RCCPTALATIMKRCWEANPEKRPEMEE 344


>At1g53140.1 68414.m06017 dynamin family protein low similarity to
           dynamin-like protein E [Arabidopsis thaliana]
           GI:19423872; contains Pfam profile PF00350: Dynamin
           family
          Length = 817

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -2

Query: 601 LILI*KFSNCLLRFGNRCKVIRKIMLSGYRAEKFR 497
           ++++ KF N L  F +R +V R +  SGY  E  R
Sbjct: 240 IVVVSKFDNRLKEFSDRGEVDRYLSASGYLGENTR 274


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,421,554
Number of Sequences: 28952
Number of extensions: 286736
Number of successful extensions: 767
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1265787216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)