Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG1017
(631 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g15870.1 68416.m02007 fatty acid desaturase family protein si... 65 4e-11
At1g06100.1 68414.m00639 fatty acid desaturase family protein si... 65 4e-11
At1g06080.1 68414.m00637 delta 9 desaturase (ADS1) identical to ... 63 1e-10
At2g31360.1 68415.m03831 delta 9 desaturase (ADS2) identical to ... 63 2e-10
At1g06120.1 68414.m00641 fatty acid desaturase family protein si... 62 3e-10
At1g06090.1 68414.m00638 fatty acid desaturase family protein si... 62 3e-10
At3g15850.1 68416.m02005 fatty acid desaturase family protein si... 61 5e-10
At1g06360.1 68414.m00672 fatty acid desaturase family protein si... 58 4e-09
At1g06350.1 68414.m00671 fatty acid desaturase family protein si... 55 4e-08
At4g12110.1 68417.m01923 sterol desaturase family protein simila... 33 0.21
At4g22753.1 68417.m03284 sterol desaturase family protein simila... 32 0.36
At2g37700.1 68415.m04623 CER1 protein, putative similar to CER1 ... 31 0.48
At4g22756.1 68417.m03285 sterol desaturase family protein simila... 31 0.83
At1g02190.2 68414.m00150 CER1 protein, putative similar to CER1 ... 30 1.5
At1g02190.1 68414.m00149 CER1 protein, putative similar to CER1 ... 30 1.5
At5g46650.1 68418.m05748 zinc finger (C3HC4-type RING finger) fa... 28 5.9
At1g53500.1 68414.m06066 NAD-dependent epimerase/dehydratase fam... 28 5.9
At1g01040.1 68414.m00004 DEAD/DEAH box helicase carpel factory /... 28 5.9
At1g02205.2 68414.m00154 CER1 protein identical to maize gl1 hom... 27 7.8
At1g02205.1 68414.m00153 CER1 protein identical to maize gl1 hom... 27 7.8
>At3g15870.1 68416.m02007 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 292
Score = 64.9 bits (151), Expect = 4e-11
Identities = 36/113 (31%), Positives = 57/113 (50%)
Frame = +2
Query: 290 WVRDHRLHHKYTDTDADPHNATRGFFFSHIGWLLVRKHPMVKIAGKSLDMSDIYCNPLLR 469
WV +HR HHK+ +T DPH+ T+GF+FSH+ W+ + G+ ++ D+ P R
Sbjct: 104 WVSNHRYHHKHCETQRDPHSPTQGFWFSHMAWIFDTSSILENCGGEE-NVDDLVRQPFYR 162
Query: 470 FQKKYAIPFIGTICFIIPTLAPMYFWGESLNNAWHITVLRYIFSLNGTFLVNS 628
F ++ + + F+ YF G W I + + L+ TFLVNS
Sbjct: 163 FLQRTVLLHMMAYSFL------FYFCGGMPLLVWGIGITIAV-RLHLTFLVNS 208
>At1g06100.1 68414.m00639 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 299
Score = 64.9 bits (151), Expect = 4e-11
Identities = 38/114 (33%), Positives = 56/114 (49%)
Frame = +2
Query: 290 WVRDHRLHHKYTDTDADPHNATRGFFFSHIGWLLVRKHPMVKIAGKSLDMSDIYCNPLLR 469
WV HR HH++TD+D DPH+ GF+FSH+ W+ + K G+ ++ D+ R
Sbjct: 110 WVSIHRFHHQFTDSDRDPHSPIEGFWFSHVLWIFDTDYIREK-CGRRNNVMDLKQQWFYR 168
Query: 470 FQKKYAIPFIGTICFIIPTLAPMYFWGESLNNAWHITVLRYIFSLNGTFLVNSA 631
F KK + I +I Y WG W + + +GT+LVNSA
Sbjct: 169 FLKKTLVLHILAFWTLI------YLWGGLPYLTWTVG-FGGVIGYHGTWLVNSA 215
>At1g06080.1 68414.m00637 delta 9 desaturase (ADS1) identical to
delta 9 acyl-lipid desaturase (ADS1) GB:BAA25180
GI:2970034 from [Arabidopsis thaliana]
Length = 305
Score = 63.3 bits (147), Expect = 1e-10
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Frame = +2
Query: 290 WVRDHRLHHKYTDTDADPHNATRGFFFSHIGWLLVRKHPMVKIAGKSLDMSDIYCNPLLR 469
WV HR HH++TD+D DPH+ GF+FSH+ WL + +V+ G+ ++ D+ +
Sbjct: 116 WVSTHRYHHQFTDSDRDPHSPNEGFWFSHLLWLFDTGY-LVEKCGRRTNVEDLKRQWYYK 174
Query: 470 FQKKYAIPFIGTICFIIPTLAPMYF--WGESLNNAW--HITVL 586
F ++ + I T F++ + F WG + A H+T L
Sbjct: 175 FLQRTVLYHILTFGFLLYYFGGLSFLTWGMGIGVAMEHHVTCL 217
>At2g31360.1 68415.m03831 delta 9 desaturase (ADS2) identical to
delta 9 acyl-lipid desaturase (ADS2) GI:2970036 from
[Arabidopsis thaliana]
Length = 307
Score = 62.9 bits (146), Expect = 2e-10
Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Frame = +2
Query: 290 WVRDHRLHHKYTDTDADPHNATRGFFFSHIGWLLVRKHPMVKIAGKSLDMSDIYCNPLLR 469
WV HR HH++TD++ DPH+ GF+FSH+ W+ + +V G+ ++ D+ R
Sbjct: 118 WVSTHRYHHQFTDSERDPHSPKEGFWFSHLLWIYDSAY-LVSKCGRRANVEDLKRQWFYR 176
Query: 470 FQKKYAIPFIGTICFIIPTLAPMYF--WGESLNNAWHITVLRYIFSL 604
F +K + I + F + L M F WG + A + V I SL
Sbjct: 177 FLQKTVLFHILGLGFFLFYLGGMSFVTWGMGVGAALEVHVTCLINSL 223
>At1g06120.1 68414.m00641 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase GB:BAA25180
GI:2970034 (ADS1) from [Arabidopsis thaliana]; supported
by cDNA:gi_12083275_gb_AF332434.1_AF332434
Length = 299
Score = 62.1 bits (144), Expect = 3e-10
Identities = 36/114 (31%), Positives = 55/114 (48%)
Frame = +2
Query: 290 WVRDHRLHHKYTDTDADPHNATRGFFFSHIGWLLVRKHPMVKIAGKSLDMSDIYCNPLLR 469
WV HR HH++TD+D DPH+ GF+FSH+ W+ + K G+ ++ D+ R
Sbjct: 110 WVSTHRFHHQFTDSDRDPHSPIEGFWFSHVFWIFDTSYIREKCGGRD-NVMDLKQQWFYR 168
Query: 470 FQKKYAIPFIGTICFIIPTLAPMYFWGESLNNAWHITVLRYIFSLNGTFLVNSA 631
F + I T ++ Y WG W + V I + T+L+NSA
Sbjct: 169 FLQNTIGLHILTFWILV------YLWGGLPYLTWSVGVGGAI-GYHATWLINSA 215
>At1g06090.1 68414.m00638 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase GB:BAA25180
GI:2970034 (ADS1) from [Arabidopsis thaliana]
Length = 299
Score = 62.1 bits (144), Expect = 3e-10
Identities = 39/114 (34%), Positives = 56/114 (49%)
Frame = +2
Query: 290 WVRDHRLHHKYTDTDADPHNATRGFFFSHIGWLLVRKHPMVKIAGKSLDMSDIYCNPLLR 469
WV HR HH++TD+D DPH+ GF+FSH+ W+ + K G+ ++ D+ R
Sbjct: 110 WVSTHRFHHQFTDSDRDPHSPIEGFWFSHVFWIFDTSYIREKCGGRD-NVMDLKQQWFYR 168
Query: 470 FQKKYAIPFIGTICFIIPTLAPMYFWGESLNNAWHITVLRYIFSLNGTFLVNSA 631
F + IG TL +Y WG + V I NGT+L+NSA
Sbjct: 169 FLRN----TIGLHILTFWTL--VYLWGGLPYLTCGVGVGGTI-GYNGTWLINSA 215
>At3g15850.1 68416.m02005 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 371
Score = 61.3 bits (142), Expect = 5e-10
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Frame = +2
Query: 290 WVRDHRLHHKYTDTDADPHNATRGFFFSHIGWLLVRKHPMVKIAGKSLDMSDIYCNPLLR 469
WV HR HH++ D+D DPH+ GF+FSH+ W+ + + + G+ ++ D+ P R
Sbjct: 181 WVSTHRYHHQFCDSDRDPHSPLDGFWFSHMNWMF-DTNTITQRCGEPNNVGDLEKQPFYR 239
Query: 470 FQKKYAI--PFIGTICFIIPTLAPMYFWGESLNNAW--HITVL 586
F + I P + P WG + W HIT L
Sbjct: 240 FLRTTYILHPLALAVALYAMGGFPFIVWGMGVRIVWVYHITWL 282
>At1g06360.1 68414.m00672 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 299
Score = 58.4 bits (135), Expect = 4e-09
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Frame = +2
Query: 290 WVRDHRLHHKYTDTDADPHNATRGFFFSHIGWLLVRKHPMVKIAGKS--LDMSDIYCNPL 463
WV HR HH++TD+D DPH+ GF+FSH+ W+ ++ K G++ +D+ +
Sbjct: 110 WVSIHRFHHQFTDSDRDPHSPIEGFWFSHVWWICDTRYIKYKCGGRNNVMDLKQQWFYWF 169
Query: 464 LRFQKKYAIPFIGTICFI 517
LR + + T+ ++
Sbjct: 170 LRMTIGFHVLMFWTVLYL 187
>At1g06350.1 68414.m00671 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 300
Score = 54.8 bits (126), Expect = 4e-08
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = +2
Query: 290 WVRDHRLHHKYTDTDADPHNATRGFFFSHIGWLLVRKHPMVKIAGKS--LDMSDIYCNPL 463
WV HR HH++TD+D DPH+ G FSHI W+ ++ K G+ LD+ +
Sbjct: 111 WVSIHRFHHQFTDSDRDPHSPKEGLLFSHILWIFDTQYIKYKCGGRDNVLDLKKQWFYKF 170
Query: 464 LRFQKKYAIPFIGTICFI 517
LR I TI ++
Sbjct: 171 LRRTIAVHILMFWTILYL 188
>At4g12110.1 68417.m01923 sterol desaturase family protein similar
to sterol 4-alpha-methyl-oxidase GI:16973471 from
[Arabidopsis thaliana]; contains Pfam profile PF01598:
Sterol desaturase
Length = 298
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 212 LLVYMDFISVSPQQNWLHRFLNTIFTWVRDHRLHHKYT 325
L+VY F+ W+HRF ++ + + + HR+HH+YT
Sbjct: 132 LVVY--FLIEDYTNYWVHRFFHSKWGYDKIHRVHHEYT 167
>At4g22753.1 68417.m03284 sterol desaturase family protein similar
to sterol 4-alpha-methyl-oxidase GI:16973471 from
[Arabidopsis thaliana]; contains Pfam profile PF01598:
Sterol desaturase
Length = 291
Score = 31.9 bits (69), Expect = 0.36
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 212 LLVYMDFISVSPQQNWLHRFLNTIFTWVRDHRLHHKYT 325
L+VY F+ W+HR+++ + + + HR+HH+YT
Sbjct: 128 LVVY--FLIEDYTNYWIHRWMHCKWGYEKIHRIHHEYT 163
>At2g37700.1 68415.m04623 CER1 protein, putative similar to CER1
GI:1199467 and maize gl1 homolog (glossy1 locus)
GI:1209703 from [Arabidopsis thaliana]; may be involved
in wax biosynthesis; contains a SUR2-type
hydroxylase/desaturase catalytic domain (PS50242)
Length = 493
Score = 31.5 bits (68), Expect = 0.48
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +2
Query: 257 WLHRFLNTIFTWVRDHRLHHKYTDTDADPHNATRGFFFSHIGWLLVRKHPMV 412
W HR L+ F + R H HH T +P + F HIG+ L+ P++
Sbjct: 140 WFHRALHHHFLYSRYHSHHHSSIVT--EPITSVVHPFAEHIGYTLILGLPLI 189
>At4g22756.1 68417.m03285 sterol desaturase family protein similar
to sterol 4-alpha-methyl-oxidase GI:16973471 from
[Arabidopsis thaliana]; contains Pfam profile PF01598:
Sterol desaturase
Length = 299
Score = 30.7 bits (66), Expect = 0.83
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 212 LLVYMDFISVSPQQNWLHRFLNTIFTWVRDHRLHHKYT 325
L+VY F+ W+HRF + + + + H +HH+YT
Sbjct: 132 LVVY--FLVEDYTNYWVHRFFHCKWGYEKFHHIHHEYT 167
>At1g02190.2 68414.m00150 CER1 protein, putative similar to CER1
GI:1199467 and maize gl1 homolog (glossy1 locus)
GI:1209703 from [Arabidopsis thaliana]
Length = 623
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +2
Query: 257 WLHRFLNTIFTWVRDHRLHHKYTDTDADPHNATRGFFFSHIGWLLVRKHPMV 412
W HR L+ F + R H HH T +P + F HI + L+ PMV
Sbjct: 144 WFHRALHHHFLYSRYHSHHHSSIVT--EPITSVVHPFAEHIAYTLLFAIPMV 193
>At1g02190.1 68414.m00149 CER1 protein, putative similar to CER1
GI:1199467 and maize gl1 homolog (glossy1 locus)
GI:1209703 from [Arabidopsis thaliana]
Length = 627
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +2
Query: 257 WLHRFLNTIFTWVRDHRLHHKYTDTDADPHNATRGFFFSHIGWLLVRKHPMV 412
W HR L+ F + R H HH T +P + F HI + L+ PMV
Sbjct: 144 WFHRALHHHFLYSRYHSHHHSSIVT--EPITSVVHPFAEHIAYTLLFAIPMV 193
>At5g46650.1 68418.m05748 zinc finger (C3HC4-type RING finger)
family protein contains similarity to RING-H2 zinc
finger protein ATL6 [Arabidopsis thaliana] GI:4928403;
contains Pfam profile PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 289
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/41 (26%), Positives = 19/41 (46%)
Frame = +1
Query: 172 IVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFEHHFHMG 294
++++ VI I G + +Y C T + HH+H G
Sbjct: 26 VIILTVILLVVFFI-GFFAIYFCKCFYHTLTEAWNHHYHNG 65
>At1g53500.1 68414.m06066 NAD-dependent epimerase/dehydratase family
protein low similarity to dTDP-D-glucose-4,6-dehydratase
from Aneurinibacillus thermoaerophilus GI:16357461,
Sphingomonas sp. GI:1314581; contains Pfam profile
PF01370: NAD dependent epimerase/dehydratase family;
putative NDP-rhamnose synthase (rhm2 gene) GI:31559258
Length = 667
Score = 27.9 bits (59), Expect = 5.9
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Frame = +2
Query: 326 DTDADPHN----ATRGFFFSHIGWLLVRKHPMVKIAGKSLDMSDIYCNPLLRFQKKYAIP 493
DT P N GF SH+ L+R +P KI LD D YC+ L ++ P
Sbjct: 3 DTTYKPKNILITGAAGFIASHVANRLIRNYPDYKIV--VLDKLD-YCSDLKNLDPSFSSP 59
>At1g01040.1 68414.m00004 DEAD/DEAH box helicase carpel factory / CAF
identical to RNA helicase/RNAseIII CAF protein
GB:AAF03534 GI:6102610 from [Arabidopsis thaliana]
Length = 1909
Score = 27.9 bits (59), Expect = 5.9
Identities = 21/58 (36%), Positives = 29/58 (50%)
Frame = -2
Query: 591 YLKTVICQALFKLSPQKYIGANVGMIKHIVPINGIAYFF*NLKRGLQ*ISDMSRLFPA 418
YLK V+ + LF PQK+ G M + +V N + Y F L +GLQ R P+
Sbjct: 1384 YLKWVVSRFLFLKYPQKHEGQLTRMRQQMVS-NMVLYQF-ALVKGLQSYIQADRFAPS 1439
>At1g02205.2 68414.m00154 CER1 protein identical to maize gl1
homolog (glossy1 locus) GI:1209703 and CER1 GI:1199467
from [Arabidopsis thaliana]
Length = 625
Score = 27.5 bits (58), Expect = 7.8
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +2
Query: 257 WLHRFLNTIFTWVRDHRLHHKYTDTDADPHNATRGFFFSHIGWLLVRKHPMV 412
WLH+ L+ F + R H HH T +P + F HI + ++ P++
Sbjct: 144 WLHKALHHHFLYSRYHSHHHSSIVT--EPITSVIHPFAEHIAYFILFAIPLL 193
>At1g02205.1 68414.m00153 CER1 protein identical to maize gl1
homolog (glossy1 locus) GI:1209703 and CER1 GI:1199467
from [Arabidopsis thaliana]
Length = 580
Score = 27.5 bits (58), Expect = 7.8
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +2
Query: 257 WLHRFLNTIFTWVRDHRLHHKYTDTDADPHNATRGFFFSHIGWLLVRKHPMV 412
WLH+ L+ F + R H HH T +P + F HI + ++ P++
Sbjct: 144 WLHKALHHHFLYSRYHSHHHSSIVT--EPITSVIHPFAEHIAYFILFAIPLL 193
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,694,463
Number of Sequences: 28952
Number of extensions: 286843
Number of successful extensions: 633
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1285411824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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