Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1015
         (621 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q552H8 Cluster: Putative uncharacterized protein; n=2; ...    33   4.2  
UniRef50_Q7QTY5 Cluster: GLP_169_22321_32229; n=1; Giardia lambl...    32   9.6  

>UniRef50_Q552H8 Cluster: Putative uncharacterized protein; n=2;
            Dictyostelium discoideum|Rep: Putative uncharacterized
            protein - Dictyostelium discoideum AX4
          Length = 1445

 Score = 33.5 bits (73), Expect = 4.2
 Identities = 18/57 (31%), Positives = 31/57 (54%)
 Frame = +3

Query: 204  LSSKWTVSTFTRLHYNNNDREIHSKILKDLVNKKV*YLTLYPICKLYFYLLRIIKTS 374
            L S   +S  T L++ NN   I+  +L DL+  K+  L LY I  L   ++++I ++
Sbjct: 1116 LKSLSNLSNITYLNFGNNQNGINEWVLSDLITPKLRKLKLYEIPTLTDLIVKLIAST 1172


>UniRef50_Q7QTY5 Cluster: GLP_169_22321_32229; n=1; Giardia lamblia
            ATCC 50803|Rep: GLP_169_22321_32229 - Giardia lamblia
            ATCC 50803
          Length = 3302

 Score = 32.3 bits (70), Expect = 9.6
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -1

Query: 174  LITIYLITHLMCV-FALIYTIRTYYWSLSSRNS 79
            L+ I L+  ++CV FA +YT R  YW     NS
Sbjct: 1924 LVVIPLLAQIVCVLFACVYTTRLLYWLFRKNNS 1956


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 538,306,764
Number of Sequences: 1657284
Number of extensions: 9729865
Number of successful extensions: 19427
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19423
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45221970467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)