Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1015
         (621 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021488-1|CAB63369.1|  502|Caenorhabditis elegans Hypothetical ...    29   2.0  
Z49867-3|CAA90029.2|  433|Caenorhabditis elegans Hypothetical pr...    28   4.7  
U40955-4|AAA81752.1|  297|Caenorhabditis elegans Hypothetical pr...    28   4.7  
U25175-1|AAC36130.1|  433|Caenorhabditis elegans GATA-factor pro...    28   4.7  
AF106575-12|AAC78165.1|  374|Caenorhabditis elegans Hypothetical...    28   6.2  

>AL021488-1|CAB63369.1|  502|Caenorhabditis elegans Hypothetical
           protein Y45F10A.2 protein.
          Length = 502

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +3

Query: 231 FTRLHY-NNNDREIHSKILKDLVNKKV*YLTLYPICKLYFYLLRIIKTS 374
           F + HY   ND ++H K+ + LV  +  +L+L       F++ R+++ S
Sbjct: 158 FLQEHYPTENDNDVHQKLFRKLVEDRAIFLSLCSNMFGNFFVQRVLECS 206


>Z49867-3|CAA90029.2|  433|Caenorhabditis elegans Hypothetical
           protein C33D3.1 protein.
          Length = 433

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -1

Query: 585 YYIWKEAPYSAIGMQELIKSYCYSFTMYQTGI 490
           YY W  A  + + M    ++Y Y+ T YQTG+
Sbjct: 370 YYQWNTAATAGLMMVPNDQNYVYAATNYQTGL 401


>U40955-4|AAA81752.1|  297|Caenorhabditis elegans Hypothetical
           protein F48B9.2 protein.
          Length = 297

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = -1

Query: 183 IARLITIYLITH-LMCVFALI-YTIRTYYWSLSSRNSTI 73
           IA LI + L    LMCV+  + YT + YYW++   N+ +
Sbjct: 259 IAFLIMLSLTFFVLMCVYGFVEYTGKPYYWNIDLGNNPV 297


>U25175-1|AAC36130.1|  433|Caenorhabditis elegans GATA-factor
           protein.
          Length = 433

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -1

Query: 585 YYIWKEAPYSAIGMQELIKSYCYSFTMYQTGI 490
           YY W  A  + + M    ++Y Y+ T YQTG+
Sbjct: 370 YYQWNTAATAGLMMVPNDQNYVYAATNYQTGL 401


>AF106575-12|AAC78165.1|  374|Caenorhabditis elegans Hypothetical
           protein K04F1.6 protein.
          Length = 374

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -1

Query: 582 YIWKEAPY-SAIGMQELIKSYCYSFTMYQTGINKKNCPN*FQFSN 451
           ++W+E    + IGM  L + YC+    Y   +   N PN   FS+
Sbjct: 131 FLWEENNLMTEIGMTNLTRCYCHIDINYNNDMKLLNLPNLKNFSS 175


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,737,096
Number of Sequences: 27780
Number of extensions: 242848
Number of successful extensions: 472
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 472
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)