Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1014
         (607 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   5.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   5.4  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               21   7.1  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    21   9.4  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   9.4  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   9.4  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    21   9.4  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -3

Query: 389 EGLHQCPYTCDVA 351
           E   QCPYT D A
Sbjct: 557 ESEEQCPYTVDAA 569


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 303  GYIGF*TPFSHG*EITGYITSIRTLMQTLIML 398
            G +GF TPF H   I+G  +++       I L
Sbjct: 978  GRVGFVTPFEHRHFISGIDSNLHVYAPLKISL 1009


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -2

Query: 108 FSNLDFNFIYLL*VI*FYNTKYLLKKFCSEQS 13
           F N  F FI ++ +I  Y  +  +KK C ++S
Sbjct: 2   FKNYHFFFILVITLIFLYFGEADIKKDCRKES 33


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -2

Query: 435 NNQPMCEKK 409
           NNQPMC  K
Sbjct: 151 NNQPMCSPK 159


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 414 SHTSAGCWCEN 446
           S T+ GCW EN
Sbjct: 320 SDTALGCWNEN 330


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 196 ASPIKHKIVVMNVIRFSYLHIAGLY 270
           A+   + +V++ V+R  YLH A  Y
Sbjct: 58  ATVFGNTLVILAVVRERYLHTATNY 82


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 482 CQGSFQQFSPLDVFA 438
           C  +FQ+F PL  FA
Sbjct: 411 CAEAFQEFPPLGRFA 425


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,008
Number of Sequences: 438
Number of extensions: 3482
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)