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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1013
         (653 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_04_0016 + 16461542-16461566,16462701-16462732,16463015-164631...   133   1e-31
07_03_1580 + 27888275-27888360,27888755-27888871,27888964-278890...   130   7e-31
07_03_1260 - 25260872-25261101,25261199-25261312,25261473-252615...   122   2e-28
01_06_1167 - 35062766-35062870,35063165-35063228,35063647-350637...    36   0.021
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443     30   1.4  
02_04_0317 + 21996324-21996681,21996833-21996859,21997299-219982...    29   3.2  
09_06_0229 + 21709510-21709532,21710021-21710041,21712386-21713577     28   5.6  

>03_04_0016 +
           16461542-16461566,16462701-16462732,16463015-16463100,
           16463189-16463305,16463399-16463474,16463695-16463818,
           16464482-16464595,16464700-16464947
          Length = 273

 Score =  133 bits (322), Expect = 1e-31
 Identities = 80/195 (41%), Positives = 104/195 (53%), Gaps = 5/195 (2%)
 Frame = +2

Query: 83  MAVGDVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQIA 262
           + + +V +  GL  L++YL  +SY+SGY  S+ D+ VF  +  APAA+  +V RWY+ I+
Sbjct: 22  ITLSNVNSEAGLQKLDEYLLTRSYISGYQASKDDMTVFTSLPSAPAASYVNVTRWYDHIS 81

Query: 263 -----SYTPAERKTWSQGTSPLXXXXXXXXXXXXXXXXXXXXVDLFGSGXXXXXXXXXXX 427
                S   AE +     ++                      VDLFG             
Sbjct: 82  ALLRSSGVTAEGEGVKVESTACSVSPTADQKAPAADEEDDDDVDLFGEETEEEKKAAEE- 140

Query: 428 XXXXLKAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLV 607
                +A A K S K     KSS+LLDVKPWDDETDM ++E  VR ++MEGLLWGASKLV
Sbjct: 141 -----RAAAVKASGKKKESGKSSVLLDVKPWDDETDMAKLEEAVRNVKMEGLLWGASKLV 195

Query: 608 PVGYGINKLQIMCVI 652
           PVGYGI KLQIM  I
Sbjct: 196 PVGYGIKKLQIMMTI 210


>07_03_1580 +
           27888275-27888360,27888755-27888871,27888964-27889045,
           27889710-27889821,27889958-27890071,27890163-27890326
          Length = 224

 Score =  130 bits (315), Expect = 7e-31
 Identities = 77/190 (40%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
 Frame = +2

Query: 95  DVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQIASYTP 274
           D+ TA GL  L Q+L+ K+YVSG   S+ D++VF  V   P A  P+  RWY+ +A+   
Sbjct: 7   DLHTADGLKALEQHLSGKTYVSGNAISKDDIKVFAAVPSKPGAEFPNAARWYDTVAAALA 66

Query: 275 AERKTWSQGTS----PLXXXXXXXXXXXXXXXXXXXXVDLFGSGXXXXXXXXXXXXXXXL 442
           +     + G +                          +DLFG                  
Sbjct: 67  SRFPGKAVGVNLPGGGAASSAAAAAPAAKDADEDDDDLDLFGDETEEDKKAAD------- 119

Query: 443 KAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVPVGYG 622
           +  A K S K     KSS+LLDVKPWDDETDMK++E  VR+++MEGL WGASKLVPVGYG
Sbjct: 120 ERAASKASSKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQMEGLTWGASKLVPVGYG 179

Query: 623 INKLQIMCVI 652
           I KLQIM  I
Sbjct: 180 IKKLQIMLTI 189


>07_03_1260 -
           25260872-25261101,25261199-25261312,25261473-25261596,
           25261755-25261839,25261917-25262033,25262122-25262207
          Length = 251

 Score =  122 bits (295), Expect = 2e-28
 Identities = 77/194 (39%), Positives = 97/194 (50%), Gaps = 8/194 (4%)
 Frame = +2

Query: 95  DVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQI----- 259
           +V +  GL  L++YL  +SY+SGY  S  D+ V+     AP+++  +V RW+  I     
Sbjct: 7   NVSSEAGLKKLDEYLLTRSYISGYQASNDDLAVYSAFSTAPSSSYTNVARWFTHIDALLR 66

Query: 260 ASYTPAER---KTWSQGTSPLXXXXXXXXXXXXXXXXXXXXVDLFGSGXXXXXXXXXXXX 430
            S   A+    K  S                          VDLFG              
Sbjct: 67  LSGVTADGQGVKVESTAVPSASTPDVADAKAPAADDDDDDDVDLFGEETEEEKKAAEE-- 124

Query: 431 XXXLKAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVP 610
               +A A K S K     KSS+LLDVKPWDDETDM ++E  VR ++MEGLLWGASKLVP
Sbjct: 125 ----RAAAVKASGKKKESGKSSVLLDVKPWDDETDMTKLEEAVRNVKMEGLLWGASKLVP 180

Query: 611 VGYGINKLQIMCVI 652
           VGYGI KLQIM  I
Sbjct: 181 VGYGIKKLQIMMTI 194


>01_06_1167 -
           35062766-35062870,35063165-35063228,35063647-35063738,
           35064137-35064205,35064322-35064412,35064509-35064732,
           35065064-35065180,35065583-35065651,35066172-35066237,
           35066335-35066505,35066581-35066661,35067620-35067700
          Length = 409

 Score = 36.3 bits (80), Expect = 0.021
 Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 9/57 (15%)
 Frame = +2

Query: 116 LNDLNQYLAEKSYV--SGYTPSQADVQVFEQV-------GKAPAANLPHVLRWYNQI 259
           L +LNQ L++KS +  +G+ PS AD+ VF  +       G+      PHVLRW + I
Sbjct: 76  LGNLNQDLSQKSVLLGNGFKPSVADIVVFATIQVFVSHLGENELQKYPHVLRWMDYI 132


>01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443
          Length = 221

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
 Frame = +2

Query: 107 AQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQV---GKAPAANL----PHVLRWYNQIAS 265
           AQ L+  + +LA   Y++G   S AD      +    K P A L    PHV  W++ I+S
Sbjct: 145 AQVLDVYDAHLAGSRYLAGNRFSLADANHMSYLLFLSKTPMAELVASRPHVKAWWDDISS 204

Query: 266 YTPAERKT 289
             PA +KT
Sbjct: 205 -RPAWKKT 211


>02_04_0317 +
           21996324-21996681,21996833-21996859,21997299-21998227,
           21998317-21999162
          Length = 719

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
 Frame = -2

Query: 238 YVGKVSGRRLANLLKYLNISLR-----RSVSRHVAFLS*ILVQVIETLGGFNVSYSHSF 77
           Y G+VS   L+  LK+L+ SLR     R V+R  A     L++++ ++G  ++ ++H +
Sbjct: 61  YPGRVSRWWLSQSLKHLDASLRRLGASRLVTRRSADAVVALIELVRSIGATHLFFNHLY 119


>09_06_0229 + 21709510-21709532,21710021-21710041,21712386-21713577
          Length = 411

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 21/64 (32%), Positives = 27/64 (42%)
 Frame = +2

Query: 56  KKVATLKETMAVGDVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPH 235
           K    L+E +A  + K A G+       A     S  TP  ADV     +   PAA+LP 
Sbjct: 19  KHATVLREMVAAAEAKAAIGVATPTPTAAPCG--STTTPRDADVDDKMTIVGHPAASLPL 76

Query: 236 VLRW 247
             RW
Sbjct: 77  ETRW 80


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,926,918
Number of Sequences: 37544
Number of extensions: 354767
Number of successful extensions: 930
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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