BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= P5PG1013 (653 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_04_0016 + 16461542-16461566,16462701-16462732,16463015-164631... 133 1e-31 07_03_1580 + 27888275-27888360,27888755-27888871,27888964-278890... 130 7e-31 07_03_1260 - 25260872-25261101,25261199-25261312,25261473-252615... 122 2e-28 01_06_1167 - 35062766-35062870,35063165-35063228,35063647-350637... 36 0.021 01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443 30 1.4 02_04_0317 + 21996324-21996681,21996833-21996859,21997299-219982... 29 3.2 09_06_0229 + 21709510-21709532,21710021-21710041,21712386-21713577 28 5.6 >03_04_0016 + 16461542-16461566,16462701-16462732,16463015-16463100, 16463189-16463305,16463399-16463474,16463695-16463818, 16464482-16464595,16464700-16464947 Length = 273 Score = 133 bits (322), Expect = 1e-31 Identities = 80/195 (41%), Positives = 104/195 (53%), Gaps = 5/195 (2%) Frame = +2 Query: 83 MAVGDVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQIA 262 + + +V + GL L++YL +SY+SGY S+ D+ VF + APAA+ +V RWY+ I+ Sbjct: 22 ITLSNVNSEAGLQKLDEYLLTRSYISGYQASKDDMTVFTSLPSAPAASYVNVTRWYDHIS 81 Query: 263 -----SYTPAERKTWSQGTSPLXXXXXXXXXXXXXXXXXXXXVDLFGSGXXXXXXXXXXX 427 S AE + ++ VDLFG Sbjct: 82 ALLRSSGVTAEGEGVKVESTACSVSPTADQKAPAADEEDDDDVDLFGEETEEEKKAAEE- 140 Query: 428 XXXXLKAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLV 607 +A A K S K KSS+LLDVKPWDDETDM ++E VR ++MEGLLWGASKLV Sbjct: 141 -----RAAAVKASGKKKESGKSSVLLDVKPWDDETDMAKLEEAVRNVKMEGLLWGASKLV 195 Query: 608 PVGYGINKLQIMCVI 652 PVGYGI KLQIM I Sbjct: 196 PVGYGIKKLQIMMTI 210 >07_03_1580 + 27888275-27888360,27888755-27888871,27888964-27889045, 27889710-27889821,27889958-27890071,27890163-27890326 Length = 224 Score = 130 bits (315), Expect = 7e-31 Identities = 77/190 (40%), Positives = 99/190 (52%), Gaps = 4/190 (2%) Frame = +2 Query: 95 DVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQIASYTP 274 D+ TA GL L Q+L+ K+YVSG S+ D++VF V P A P+ RWY+ +A+ Sbjct: 7 DLHTADGLKALEQHLSGKTYVSGNAISKDDIKVFAAVPSKPGAEFPNAARWYDTVAAALA 66 Query: 275 AERKTWSQGTS----PLXXXXXXXXXXXXXXXXXXXXVDLFGSGXXXXXXXXXXXXXXXL 442 + + G + +DLFG Sbjct: 67 SRFPGKAVGVNLPGGGAASSAAAAAPAAKDADEDDDDLDLFGDETEEDKKAAD------- 119 Query: 443 KAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVPVGYG 622 + A K S K KSS+LLDVKPWDDETDMK++E VR+++MEGL WGASKLVPVGYG Sbjct: 120 ERAASKASSKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQMEGLTWGASKLVPVGYG 179 Query: 623 INKLQIMCVI 652 I KLQIM I Sbjct: 180 IKKLQIMLTI 189 >07_03_1260 - 25260872-25261101,25261199-25261312,25261473-25261596, 25261755-25261839,25261917-25262033,25262122-25262207 Length = 251 Score = 122 bits (295), Expect = 2e-28 Identities = 77/194 (39%), Positives = 97/194 (50%), Gaps = 8/194 (4%) Frame = +2 Query: 95 DVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQI----- 259 +V + GL L++YL +SY+SGY S D+ V+ AP+++ +V RW+ I Sbjct: 7 NVSSEAGLKKLDEYLLTRSYISGYQASNDDLAVYSAFSTAPSSSYTNVARWFTHIDALLR 66 Query: 260 ASYTPAER---KTWSQGTSPLXXXXXXXXXXXXXXXXXXXXVDLFGSGXXXXXXXXXXXX 430 S A+ K S VDLFG Sbjct: 67 LSGVTADGQGVKVESTAVPSASTPDVADAKAPAADDDDDDDVDLFGEETEEEKKAAEE-- 124 Query: 431 XXXLKAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVP 610 +A A K S K KSS+LLDVKPWDDETDM ++E VR ++MEGLLWGASKLVP Sbjct: 125 ----RAAAVKASGKKKESGKSSVLLDVKPWDDETDMTKLEEAVRNVKMEGLLWGASKLVP 180 Query: 611 VGYGINKLQIMCVI 652 VGYGI KLQIM I Sbjct: 181 VGYGIKKLQIMMTI 194 >01_06_1167 - 35062766-35062870,35063165-35063228,35063647-35063738, 35064137-35064205,35064322-35064412,35064509-35064732, 35065064-35065180,35065583-35065651,35066172-35066237, 35066335-35066505,35066581-35066661,35067620-35067700 Length = 409 Score = 36.3 bits (80), Expect = 0.021 Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 9/57 (15%) Frame = +2 Query: 116 LNDLNQYLAEKSYV--SGYTPSQADVQVFEQV-------GKAPAANLPHVLRWYNQI 259 L +LNQ L++KS + +G+ PS AD+ VF + G+ PHVLRW + I Sbjct: 76 LGNLNQDLSQKSVLLGNGFKPSVADIVVFATIQVFVSHLGENELQKYPHVLRWMDYI 132 >01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443 Length = 221 Score = 30.3 bits (65), Expect = 1.4 Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 7/68 (10%) Frame = +2 Query: 107 AQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQV---GKAPAANL----PHVLRWYNQIAS 265 AQ L+ + +LA Y++G S AD + K P A L PHV W++ I+S Sbjct: 145 AQVLDVYDAHLAGSRYLAGNRFSLADANHMSYLLFLSKTPMAELVASRPHVKAWWDDISS 204 Query: 266 YTPAERKT 289 PA +KT Sbjct: 205 -RPAWKKT 211 >02_04_0317 + 21996324-21996681,21996833-21996859,21997299-21998227, 21998317-21999162 Length = 719 Score = 29.1 bits (62), Expect = 3.2 Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 5/59 (8%) Frame = -2 Query: 238 YVGKVSGRRLANLLKYLNISLR-----RSVSRHVAFLS*ILVQVIETLGGFNVSYSHSF 77 Y G+VS L+ LK+L+ SLR R V+R A L++++ ++G ++ ++H + Sbjct: 61 YPGRVSRWWLSQSLKHLDASLRRLGASRLVTRRSADAVVALIELVRSIGATHLFFNHLY 119 >09_06_0229 + 21709510-21709532,21710021-21710041,21712386-21713577 Length = 411 Score = 28.3 bits (60), Expect = 5.6 Identities = 21/64 (32%), Positives = 27/64 (42%) Frame = +2 Query: 56 KKVATLKETMAVGDVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPH 235 K L+E +A + K A G+ A S TP ADV + PAA+LP Sbjct: 19 KHATVLREMVAAAEAKAAIGVATPTPTAAPCG--STTTPRDADVDDKMTIVGHPAASLPL 76 Query: 236 VLRW 247 RW Sbjct: 77 ETRW 80 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,926,918 Number of Sequences: 37544 Number of extensions: 354767 Number of successful extensions: 930 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 905 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 929 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1632177336 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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