BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG1012
(600 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ080895-1|AAY89541.1| 120|Anopheles gambiae olfactory receptor... 23 5.7
DQ080879-1|AAY89525.1| 120|Anopheles gambiae olfactory receptor... 23 7.5
AJ441131-8|CAD29637.1| 756|Anopheles gambiae putative 5-oxoprol... 23 7.5
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol... 23 7.5
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s... 23 7.5
>DQ080895-1|AAY89541.1| 120|Anopheles gambiae olfactory receptor 38
protein.
Length = 120
Score = 23.4 bits (48), Expect = 5.7
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = -3
Query: 316 APVSTSRPHIFTQSSVFSFSNRLTGESSTWEPFIRDSNRN*LRVYVTIVVA 164
APV+ +RP +F F ++ W P +R R YV +++A
Sbjct: 6 APVTDARPQTPEDCGMFKFQRKILLIFGCWPP-----DRRTRRWYVKVLIA 51
>DQ080879-1|AAY89525.1| 120|Anopheles gambiae olfactory receptor 38
protein.
Length = 120
Score = 23.0 bits (47), Expect = 7.5
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = -3
Query: 316 APVSTSRPHIFTQSSVFSFSNRLTGESSTWEPFIRDSNRN*LRVYVTIVVA 164
APV+ +RP +F F ++ W P +R R YV +++A
Sbjct: 6 APVTDARPQTPEDCGIFKFQRKILLIFGCWPP-----DRLTRRWYVKVLIA 51
>AJ441131-8|CAD29637.1| 756|Anopheles gambiae putative
5-oxoprolinase protein.
Length = 756
Score = 23.0 bits (47), Expect = 7.5
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 33 IRGLEVLFTQSVCALIIVIHFR 98
+RG +VLF QS L + HFR
Sbjct: 265 LRGADVLFMQSDGGLTRMEHFR 286
>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
5-oxoprolinase protein.
Length = 1344
Score = 23.0 bits (47), Expect = 7.5
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 33 IRGLEVLFTQSVCALIIVIHFR 98
+RG +VLF QS L + HFR
Sbjct: 265 LRGADVLFMQSDGGLTRMEHFR 286
>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
symporter protein.
Length = 1127
Score = 23.0 bits (47), Expect = 7.5
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 330 RVSAGHQYQPRGHIFLLSHLFFPLATG*LA 241
RVS G Q+ F + +FFP ATG LA
Sbjct: 388 RVSKGTQHD----FFSVFSIFFPAATGILA 413
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,795
Number of Sequences: 2352
Number of extensions: 11727
Number of successful extensions: 72
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -