Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1012
         (600 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ001866-1|CAA05057.1|  496|Homo sapiens TPR Repeat Protein D pr...    33   0.58 
D84295-1|BAA12302.1| 1792|Homo sapiens possible protein TPRDII p...    29   9.4  
D84294-1|BAA12301.1| 2025|Homo sapiens TPRDI protein.                  29   9.4  
D83327-1|BAA23666.1| 1941|Homo sapiens DCRR1 protein.                  29   9.4  
D83077-1|BAA11769.1| 2025|Homo sapiens TPRD protein.                   29   9.4  
BC092466-1|AAH92466.1|  780|Homo sapiens TTC3 protein protein.         29   9.4  
BC063033-1|AAH63033.1|  782|Homo sapiens TTC3 protein protein.         29   9.4  

>AJ001866-1|CAA05057.1|  496|Homo sapiens TPR Repeat Protein D
           protein.
          Length = 496

 Score = 33.5 bits (73), Expect = 0.58
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +2

Query: 224 FPSGGLASQPVAKGKNR*LSKNMWPRG*Y-WCPALTLREAHSW 349
           FP  G     +  GK   + KN WP+G Y +C AL++   + W
Sbjct: 155 FPRTGQFRNALGDGKRATILKNTWPKGHYRYCDALSMLGEYDW 197


>D84295-1|BAA12302.1| 1792|Homo sapiens possible protein TPRDII
           protein.
          Length = 1792

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +2

Query: 263 GKNR*LSKNMWPRG*Y-WCPALTLREAHSW 349
           GK   + KN WP+G Y +C AL++   + W
Sbjct: 55  GKRATILKNTWPKGHYRYCDALSMLGEYDW 84


>D84294-1|BAA12301.1| 2025|Homo sapiens TPRDI protein.
          Length = 2025

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +2

Query: 263 GKNR*LSKNMWPRG*Y-WCPALTLREAHSW 349
           GK   + KN WP+G Y +C AL++   + W
Sbjct: 288 GKRATILKNTWPKGHYRYCDALSMLGEYDW 317


>D83327-1|BAA23666.1| 1941|Homo sapiens DCRR1 protein.
          Length = 1941

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +2

Query: 263 GKNR*LSKNMWPRG*Y-WCPALTLREAHSW 349
           GK   + KN WP+G Y +C AL++   + W
Sbjct: 204 GKRATILKNTWPKGHYRYCDALSMLGEYDW 233


>D83077-1|BAA11769.1| 2025|Homo sapiens TPRD protein.
          Length = 2025

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +2

Query: 263 GKNR*LSKNMWPRG*Y-WCPALTLREAHSW 349
           GK   + KN WP+G Y +C AL++   + W
Sbjct: 288 GKRATILKNTWPKGHYRYCDALSMLGEYDW 317


>BC092466-1|AAH92466.1|  780|Homo sapiens TTC3 protein protein.
          Length = 780

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +2

Query: 263 GKNR*LSKNMWPRG*Y-WCPALTLREAHSW 349
           GK   + KN WP+G Y +C AL++   + W
Sbjct: 288 GKRATILKNTWPKGHYRYCDALSMLGEYDW 317


>BC063033-1|AAH63033.1|  782|Homo sapiens TTC3 protein protein.
          Length = 782

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +2

Query: 263 GKNR*LSKNMWPRG*Y-WCPALTLREAHSW 349
           GK   + KN WP+G Y +C AL++   + W
Sbjct: 288 GKRATILKNTWPKGHYRYCDALSMLGEYDW 317


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,478,400
Number of Sequences: 237096
Number of extensions: 1599690
Number of successful extensions: 2439
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2439
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)