Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1012
         (600 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical pr...    28   5.9  
DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein.     28   5.9  
Z81470-7|CAB03885.1|  129|Caenorhabditis elegans Hypothetical pr...    27   7.7  

>Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical protein
            E03A3.6 protein.
          Length = 2089

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +2

Query: 2    AVAGTRIISMYSWPRSSLYTICMCFD 79
            +VA   II++ + PR +L  +CMCF+
Sbjct: 1045 SVAQRAIIALRAMPRHTLKLMCMCFE 1070


>Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical protein
            E03A3.6 protein.
          Length = 2089

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +2

Query: 2    AVAGTRIISMYSWPRSSLYTICMCFD 79
            +VA   II++ + PR +L  +CMCF+
Sbjct: 1045 SVAQRAIIALRAMPRHTLKLMCMCFE 1070


>DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein.
          Length = 2084

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +2

Query: 2    AVAGTRIISMYSWPRSSLYTICMCFD 79
            +VA   II++ + PR +L  +CMCF+
Sbjct: 1048 SVAQRAIIALRAMPRHTLKLMCMCFE 1073


>Z81470-7|CAB03885.1|  129|Caenorhabditis elegans Hypothetical
           protein C14A6.8 protein.
          Length = 129

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
 Frame = +2

Query: 23  ISMYSWPRSSLYTICMCF---DYCNTFQIIIFKI 115
           + ++ W    ++ IC+CF    Y NT+ I IF +
Sbjct: 96  VKIFFWTMIGIWVICLCFFVLIYLNTYGIRIFPL 129


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,965,341
Number of Sequences: 27780
Number of extensions: 254483
Number of successful extensions: 511
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 511
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)