Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG1011
(528 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067937-7|AAN84819.1| 392|Caenorhabditis elegans Hypothetical ... 81 6e-16
AF067937-6|AAF99915.1| 426|Caenorhabditis elegans Hypothetical ... 81 6e-16
AF067937-5|AAF99917.2| 422|Caenorhabditis elegans Hypothetical ... 70 9e-13
AC024200-1|AAF35996.1| 196|Caenorhabditis elegans Hypothetical ... 31 0.51
Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z82055-3|CAB04845.1| 385|Caenorhabditis elegans Hypothetical pr... 27 6.3
U97407-1|AAB52478.2| 411|Caenorhabditis elegans Hypothetical pr... 27 8.3
>AF067937-7|AAN84819.1| 392|Caenorhabditis elegans Hypothetical
protein F22F7.1b protein.
Length = 392
Score = 80.6 bits (190), Expect = 6e-16
Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 1/119 (0%)
Frame = +2
Query: 110 MEKLDLLVLGATGFTGKSTVNFLRELTKEPEYHNVKWGIAGRSEKKLNILLKELSELKIR 289
M + D++V GA+GFTG V +L ++ + + +AGRSEKKL +L+ +S+ +
Sbjct: 1 MSRYDVVVYGASGFTGAYVVEYL---VNSEQFEGLSFAVAGRSEKKLREVLRNISQKTGK 57
Query: 290 -TSSIVVIKCDINNQTELRNATGRTKILINCTGPHSILGEAVIKSCIETRTHYVDISAE 463
S+ VI D ++ L + ++IN GP+ + GEAV+K+ +E +VDIS E
Sbjct: 58 DVSNAAVIVADSADERSLNEMARQANVVINAVGPYRLYGEAVVKAAVENGASHVDISGE 116
>AF067937-6|AAF99915.1| 426|Caenorhabditis elegans Hypothetical
protein F22F7.1a protein.
Length = 426
Score = 80.6 bits (190), Expect = 6e-16
Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 1/119 (0%)
Frame = +2
Query: 110 MEKLDLLVLGATGFTGKSTVNFLRELTKEPEYHNVKWGIAGRSEKKLNILLKELSELKIR 289
M + D++V GA+GFTG V +L ++ + + +AGRSEKKL +L+ +S+ +
Sbjct: 1 MSRYDVVVYGASGFTGAYVVEYL---VNSEQFEGLSFAVAGRSEKKLREVLRNISQKTGK 57
Query: 290 -TSSIVVIKCDINNQTELRNATGRTKILINCTGPHSILGEAVIKSCIETRTHYVDISAE 463
S+ VI D ++ L + ++IN GP+ + GEAV+K+ +E +VDIS E
Sbjct: 58 DVSNAAVIVADSADERSLNEMARQANVVINAVGPYRLYGEAVVKAAVENGASHVDISGE 116
>AF067937-5|AAF99917.2| 422|Caenorhabditis elegans Hypothetical
protein F22F7.2 protein.
Length = 422
Score = 70.1 bits (164), Expect = 9e-13
Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 3/119 (2%)
Frame = +2
Query: 116 KLDLLVLGATGFTGKSTVNFLRELTKEPEYHNVKWGIAGRSEKKLNILLKELSE---LKI 286
+ D+++ GATG TG L K + N IAGRSEKKL +L++L + +
Sbjct: 4 RYDVVIYGATGVTGGKIFETLISCGK---FDNYSIAIAGRSEKKLEEVLEKLEKSTGTSL 60
Query: 287 RTSSIVVIKCDINNQTELRNATGRTKILINCTGPHSILGEAVIKSCIETRTHYVDISAE 463
+T I ++ CD N+ + R K+++N GP + GEAV+K+ +E + +D++ E
Sbjct: 61 KTR-IGLLVCDSTNEESMGKMARRAKLIVNAVGPFRLHGEAVVKAAVENGANQIDVAGE 118
>AC024200-1|AAF35996.1| 196|Caenorhabditis elegans Hypothetical
protein Y71F9AL.11 protein.
Length = 196
Score = 31.1 bits (67), Expect = 0.51
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = -1
Query: 321 MSHFMTTMLDVLIFNSESSLSKMLSFFSDRPA-IPHFTL*YS 199
M+ F+ T + + F SES S++ FF ++PA +P+ L +S
Sbjct: 1 MASFLATKVSIFRFLSESRKSEIFQFFIEKPAGLPYLHLQFS 42
>Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -3
Query: 307 DDYAGRSDF*LRKLFK*NVKFFFRSSGNTPLHVMIF 200
D Y G S+ +RKLF + + R N+ LH++IF
Sbjct: 369 DKYVGESESNVRKLFADAEEEWRRCGANSGLHIIIF 404
>Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -3
Query: 307 DDYAGRSDF*LRKLFK*NVKFFFRSSGNTPLHVMIF 200
D Y G S+ +RKLF + + R N+ LH++IF
Sbjct: 369 DKYVGESESNVRKLFADAEEEWRRCGANSGLHIIIF 404
>Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical
protein H15N14.2b protein.
Length = 758
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -3
Query: 307 DDYAGRSDF*LRKLFK*NVKFFFRSSGNTPLHVMIF 200
D Y G S+ +RKLF + + R N+ LH++IF
Sbjct: 303 DKYVGESESNVRKLFADAEEEWRRCGANSGLHIIIF 338
>Z82055-3|CAB04845.1| 385|Caenorhabditis elegans Hypothetical
protein T26H2.3 protein.
Length = 385
Score = 27.5 bits (58), Expect = 6.3
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = -1
Query: 357 LPVAFLNSV*LLMSHFMT---TMLDVLIFNSE 271
LP+AF+ ++ + SHF+ + D+LI NSE
Sbjct: 224 LPLAFIQNLDIFKSHFLAHQYQLNDILIMNSE 255
>U97407-1|AAB52478.2| 411|Caenorhabditis elegans Hypothetical
protein C34G6.5 protein.
Length = 411
Score = 27.1 bits (57), Expect = 8.3
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -1
Query: 387 GPVQFIKIFVLPVAFLNSV*LLMSHFMTTMLDVLIFNSESSLSKMLSFF 241
G +K+F F SV +++ HF L+F+S+ LS LS+F
Sbjct: 80 GHFNIVKLFEF-FHFNGSVAIVLEHFPHCTATELLFHSKRDLSFALSYF 127
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,437,420
Number of Sequences: 27780
Number of extensions: 210496
Number of successful extensions: 586
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 583
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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