Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1010
         (628 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0081 + 22248963-22249016,22249120-22249165,22249259-222493...    38   0.005
01_05_0668 - 24147412-24147618,24148019-24148286,24149506-241497...    36   0.035

>05_05_0081 +
           22248963-22249016,22249120-22249165,22249259-22249357,
           22250178-22250337,22250858-22251128,22251295-22251486
          Length = 273

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +2

Query: 452 ETPGAVPEAETQPQSN-HNFWTIEYYQKYFDVQTSEVVERIISSVLP 589
           + PG   + + + Q+N   ++ +  Y  YF+V T  VV+R+ISSV P
Sbjct: 60  QPPGTPADGDVETQTNWKGYFNVASYAPYFNVDTDVVVDRLISSVYP 106


>01_05_0668 -
           24147412-24147618,24148019-24148286,24149506-24149728,
           24149822-24149996
          Length = 290

 Score = 35.5 bits (78), Expect = 0.035
 Identities = 19/38 (50%), Positives = 24/38 (63%)
 Frame = +2

Query: 509 WTIEYYQKYFDVQTSEVVERIISSVLPQKVSRNYFDEK 622
           +++  Y+ YFDV TS+VVERI  SV P    R  F EK
Sbjct: 92  FSVAAYKPYFDVDTSDVVERIWESVFP---FRGTFTEK 126


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,668,190
Number of Sequences: 37544
Number of extensions: 257454
Number of successful extensions: 545
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 545
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)