Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1010
         (628 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC013014-1|AAH13014.1|  316|Homo sapiens Yip1 domain family, mem...    50   7e-06
BC000056-1|AAH00056.1|  316|Homo sapiens YIPF2 protein protein.        50   7e-06
BC064590-1|AAH64590.1|  306|Homo sapiens Yip1 domain family, mem...    43   0.001
D10704-1|BAA01547.1|  456|Homo sapiens choline kinase protein.         30   7.7  
BC036471-1|AAH36471.1|  439|Homo sapiens choline kinase alpha pr...    30   7.7  

>BC013014-1|AAH13014.1|  316|Homo sapiens Yip1 domain family, member
           2 protein.
          Length = 316

 Score = 50.0 bits (114), Expect = 7e-06
 Identities = 22/48 (45%), Positives = 30/48 (62%)
 Frame = +2

Query: 449 DETPGAVPEAETQPQSNHNFWTIEYYQKYFDVQTSEVVERIISSVLPQ 592
           +E+  A    E Q Q    FWT  YYQ +FDV TS+V++RI  S+LP+
Sbjct: 58  EESDKAALLQEQQQQQQPGFWTFSYYQSFFDVDTSQVLDRIKGSLLPR 105


>BC000056-1|AAH00056.1|  316|Homo sapiens YIPF2 protein protein.
          Length = 316

 Score = 50.0 bits (114), Expect = 7e-06
 Identities = 22/48 (45%), Positives = 30/48 (62%)
 Frame = +2

Query: 449 DETPGAVPEAETQPQSNHNFWTIEYYQKYFDVQTSEVVERIISSVLPQ 592
           +E+  A    E Q Q    FWT  YYQ +FDV TS+V++RI  S+LP+
Sbjct: 58  EESDKAALLQEQQQQQQPGFWTFSYYQSFFDVDTSQVLDRIKGSLLPR 105


>BC064590-1|AAH64590.1|  306|Homo sapiens Yip1 domain family, member
           1 protein.
          Length = 306

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = +2

Query: 506 FWTIEYYQKYFDVQTSEVVERIISSVLP 589
           FWT EYYQ +FDV T +V +RI  S+LP
Sbjct: 76  FWTFEYYQTFFDVDTYQVFDRIKGSLLP 103


>D10704-1|BAA01547.1|  456|Homo sapiens choline kinase protein.
          Length = 456

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = -2

Query: 336 FNNSPVWTFDMVTGHLECFLKYNFIRKTKSNKF*KISLYNIGL 208
           FN  P W F  +  +L+  L+  F  +++  K  K+  YN+ L
Sbjct: 241 FNKEPKWLFGTMEKYLKEVLRIKFTEESRIKKLHKLLSYNLPL 283


>BC036471-1|AAH36471.1|  439|Homo sapiens choline kinase alpha
           protein.
          Length = 439

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = -2

Query: 336 FNNSPVWTFDMVTGHLECFLKYNFIRKTKSNKF*KISLYNIGL 208
           FN  P W F  +  +L+  L+  F  +++  K  K+  YN+ L
Sbjct: 224 FNKEPKWLFGTMEKYLKEVLRIKFTEESRIKKLHKLLSYNLPL 266


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,688,128
Number of Sequences: 237096
Number of extensions: 1515250
Number of successful extensions: 2754
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2754
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)