Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1010
         (628 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF125459-4|AAD12839.1|  287|Caenorhabditis elegans Hypothetical ...    48   7e-06
AF125459-3|AAX88817.1|  277|Caenorhabditis elegans Hypothetical ...    48   7e-06
AF125459-2|AAX88818.1|  414|Caenorhabditis elegans Hypothetical ...    48   7e-06
Z99277-2|CAB16487.1|  557|Caenorhabditis elegans Hypothetical pr...    31   0.51 
Z83233-7|CAB05764.2|  340|Caenorhabditis elegans Hypothetical pr...    29   3.6  

>AF125459-4|AAD12839.1|  287|Caenorhabditis elegans Hypothetical
           protein Y25C1A.7b protein.
          Length = 287

 Score = 47.6 bits (108), Expect = 7e-06
 Identities = 18/39 (46%), Positives = 31/39 (79%)
 Frame = +2

Query: 503 NFWTIEYYQKYFDVQTSEVVERIISSVLPQKVSRNYFDE 619
           NF++ EYYQ++FDV+T +V++R+++SV+P    RNY  +
Sbjct: 72  NFFSFEYYQQFFDVETDQVIKRLLNSVIP--THRNYIQD 108


>AF125459-3|AAX88817.1|  277|Caenorhabditis elegans Hypothetical
           protein Y25C1A.7a protein.
          Length = 277

 Score = 47.6 bits (108), Expect = 7e-06
 Identities = 18/39 (46%), Positives = 31/39 (79%)
 Frame = +2

Query: 503 NFWTIEYYQKYFDVQTSEVVERIISSVLPQKVSRNYFDE 619
           NF++ EYYQ++FDV+T +V++R+++SV+P    RNY  +
Sbjct: 62  NFFSFEYYQQFFDVETDQVIKRLLNSVIP--THRNYIQD 98


>AF125459-2|AAX88818.1|  414|Caenorhabditis elegans Hypothetical
           protein Y25C1A.7c protein.
          Length = 414

 Score = 47.6 bits (108), Expect = 7e-06
 Identities = 18/39 (46%), Positives = 31/39 (79%)
 Frame = +2

Query: 503 NFWTIEYYQKYFDVQTSEVVERIISSVLPQKVSRNYFDE 619
           NF++ EYYQ++FDV+T +V++R+++SV+P    RNY  +
Sbjct: 62  NFFSFEYYQQFFDVETDQVIKRLLNSVIP--THRNYIQD 98


>Z99277-2|CAB16487.1|  557|Caenorhabditis elegans Hypothetical
           protein Y53C12A.3 protein.
          Length = 557

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 13/34 (38%), Positives = 23/34 (67%)
 Frame = +2

Query: 503 NFWTIEYYQKYFDVQTSEVVERIISSVLPQKVSR 604
           ++  I+ ++ YFDV  +EV  R+I S +P+K S+
Sbjct: 87  SYGRIDLFRPYFDVDPAEVRTRLIRSFIPRKPSQ 120


>Z83233-7|CAB05764.2|  340|Caenorhabditis elegans Hypothetical
           protein K06B4.7 protein.
          Length = 340

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = -2

Query: 333 NNSPVWTFDMVTGHLECFLKYNFIRKTKSNKF*KISLYNIGLSKC 199
           N+   W+  M    +  FL +NFIR   S+    +  YNI  + C
Sbjct: 138 NDVDQWSIMMAYSRISYFLDFNFIRDLDSSDKNTLFKYNISRAGC 182


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,480,213
Number of Sequences: 27780
Number of extensions: 263587
Number of successful extensions: 667
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)