Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1009
         (528 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    23   1.7  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   2.9  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   2.9  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    22   3.8  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    21   5.1  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    21   5.1  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    21   5.1  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   8.9  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   8.9  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.9  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   8.9  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   8.9  

>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -3

Query: 367 QSMMPVLKIGSCLVTPHTVFLYILDIYNPWFVY*DE 260
           Q+ + V   GSCL  P  +F     I   WF + D+
Sbjct: 105 QTNVVVKHNGSCLYVPPGIFKSTCKIDITWFPFDDQ 140


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -2

Query: 209 HKKLIFEIITSIRTTIV*LCIFSFDQSRN 123
           ++KLI   +TSI T +V L  F     RN
Sbjct: 387 NRKLISSTVTSIATYLVMLMQFRLTLMRN 415


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -2

Query: 209 HKKLIFEIITSIRTTIV*LCIFSFDQSRN 123
           ++KLI   +TSI T +V L  F     RN
Sbjct: 387 NRKLISSTVTSIATYLVMLMQFRLTLMRN 415


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -3

Query: 367 QSMMPVLKIGSCLVTPHTVFLYILDIYNPWFVY*DE 260
           Q+ + V   GSCL  P  +F     +   WF + D+
Sbjct: 105 QTNVVVKHNGSCLYVPPGIFKSTCKMDITWFPFDDQ 140


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 340 GSCLVTPHTVFLYILDIYNPWFVY*DE 260
           GSCL  P  +F     +   WF + D+
Sbjct: 114 GSCLYVPPGIFKSTCKMDITWFPFDDQ 140


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 340 GSCLVTPHTVFLYILDIYNPWFVY*DE 260
           GSCL  P  +F     +   WF + D+
Sbjct: 114 GSCLYVPPGIFKSTCKMDITWFPFDDQ 140


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 340 GSCLVTPHTVFLYILDIYNPWFVY*DE 260
           GSCL  P  +F     +   WF + D+
Sbjct: 114 GSCLYVPPGIFKSTCKMDITWFPFDDQ 140


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -2

Query: 377 SVWTKYDASFEDWKLPCNTSHSFLIYIRYLQSLVCLL 267
           SV T    SFE +   C    +  I  +   SL+CLL
Sbjct: 157 SVLTILAISFERYYAICKPLKAGYICTKTRASLICLL 193


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -2

Query: 377 SVWTKYDASFEDWKLPCNTSHSFLIYIRYLQSLVCLL 267
           SV T    SFE +   C    +  I  +   SL+CLL
Sbjct: 157 SVLTILAISFERYYAICKPLKAGYICTKTRASLICLL 193


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 87  LSFVLVYNR*NAITGLIE 140
           LS+ ++YN  N +T L+E
Sbjct: 17  LSYKVMYNGNNNVTDLVE 34


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +2

Query: 38  IANAYDRYPRLIYLNFFILRSG 103
           I+   D +PR     FF++  G
Sbjct: 309 ISTIKDNFPRFYAARFFVINRG 330


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +2

Query: 38  IANAYDRYPRLIYLNFFILRSG 103
           I+   D +PR     FF++  G
Sbjct: 309 ISTIKDNFPRFYAARFFVINRG 330


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,387
Number of Sequences: 336
Number of extensions: 2676
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12782794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)