Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1009
         (528 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81491-17|CAO82030.1|  959|Caenorhabditis elegans Hypothetical p...    29   2.7  
Z81092-2|CAB03145.3|  959|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z93384-4|CAE17903.1|  308|Caenorhabditis elegans Hypothetical pr...    27   6.3  
AL021492-15|CAE18000.1|  308|Caenorhabditis elegans Hypothetical...    27   6.3  
Z83238-8|CAB05799.2|  355|Caenorhabditis elegans Hypothetical pr...    27   8.3  
AF077544-5|AAK39240.1|  398|Caenorhabditis elegans Aspartyl prot...    27   8.3  

>Z81491-17|CAO82030.1|  959|Caenorhabditis elegans Hypothetical
           protein F58D12.3 protein.
          Length = 959

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +3

Query: 339 PIFKTGIILCPY*SDLNTYYINTSLLASI*RSNKNIRSN 455
           P+ +T IIL P  ++   Y + +SL+     SN NIRS+
Sbjct: 186 PMVRTKIILTPDSTEFMDYNVLSSLIIGRCESNSNIRSS 224


>Z81092-2|CAB03145.3|  959|Caenorhabditis elegans Hypothetical
           protein F58D12.3 protein.
          Length = 959

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +3

Query: 339 PIFKTGIILCPY*SDLNTYYINTSLLASI*RSNKNIRSN 455
           P+ +T IIL P  ++   Y + +SL+     SN NIRS+
Sbjct: 186 PMVRTKIILTPDSTEFMDYNVLSSLIIGRCESNSNIRSS 224


>Z93384-4|CAE17903.1|  308|Caenorhabditis elegans Hypothetical
           protein Y45F10D.15 protein.
          Length = 308

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -2

Query: 212 KHKKLIFEIITSIRTTIV*LCIFSF 138
           KH+ + FE+ T +R T+V   +FSF
Sbjct: 118 KHRSVSFEVTTRMRRTLVAFNLFSF 142


>AL021492-15|CAE18000.1|  308|Caenorhabditis elegans Hypothetical
           protein Y45F10D.15 protein.
          Length = 308

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -2

Query: 212 KHKKLIFEIITSIRTTIV*LCIFSF 138
           KH+ + FE+ T +R T+V   +FSF
Sbjct: 118 KHRSVSFEVTTRMRRTLVAFNLFSF 142


>Z83238-8|CAB05799.2|  355|Caenorhabditis elegans Hypothetical
           protein T08G3.10 protein.
          Length = 355

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -2

Query: 197 IFEIITSIRTTI-V*LCIFSFDQSRNGISSIINQN 96
           IF+ I +I  T+ + LC F   Q R  + SII +N
Sbjct: 309 IFQFINTINATVHLLLCYFMSSQYRRTVRSIIRKN 343


>AF077544-5|AAK39240.1|  398|Caenorhabditis elegans Aspartyl
           protease protein 3 protein.
          Length = 398

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +3

Query: 192 KNEFFVFWLCRDINE 236
           KN+ F FWL RD N+
Sbjct: 209 KNQLFAFWLSRDAND 223


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,731,339
Number of Sequences: 27780
Number of extensions: 236381
Number of successful extensions: 436
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 436
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)