Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1009
         (528 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g44820.2 68415.m05579 expressed protein                             29   2.6  
At2g44820.1 68415.m05578 expressed protein                             29   2.6  

>At2g44820.2 68415.m05579 expressed protein
          Length = 194

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = -2

Query: 143 SFDQSRNGISSIINQNEG*KNLSKSVA--GICHTHWR 39
           S ++ + G+ S I+QN   KN+ K VA  G  H  W+
Sbjct: 7   SMEKKKEGMGSTIDQNLSFKNIMKDVALFGSSHMTWK 43


>At2g44820.1 68415.m05578 expressed protein
          Length = 194

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = -2

Query: 143 SFDQSRNGISSIINQNEG*KNLSKSVA--GICHTHWR 39
           S ++ + G+ S I+QN   KN+ K VA  G  H  W+
Sbjct: 7   SMEKKKEGMGSTIDQNLSFKNIMKDVALFGSSHMTWK 43


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,771,377
Number of Sequences: 28952
Number of extensions: 205824
Number of successful extensions: 298
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 298
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 977150592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)