Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG1008
(594 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY308063-1|AAQ75554.1| 290|Caenorhabditis elegans EXC-4 protein. 80 1e-15
AL132876-18|CAD21669.2| 290|Caenorhabditis elegans Hypothetical... 80 1e-15
Z80223-7|CAB02316.2| 613|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z81561-1|CAB04552.2| 550|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z70783-7|CAA94858.1| 239|Caenorhabditis elegans Hypothetical pr... 28 4.4
AL132948-33|CAD57708.2| 734|Caenorhabditis elegans Hypothetical... 27 7.6
AL132948-32|CAD31833.3| 731|Caenorhabditis elegans Hypothetical... 27 7.6
AC006794-2|AAK68505.2| 622|Caenorhabditis elegans Hypothetical ... 27 7.6
>AY308063-1|AAQ75554.1| 290|Caenorhabditis elegans EXC-4 protein.
Length = 290
Score = 79.8 bits (188), Expect = 1e-15
Identities = 53/136 (38%), Positives = 71/136 (52%), Gaps = 3/136 (2%)
Frame = +2
Query: 146 EIAENGTANGDVPEIELIIKASTIDGRRKGACLFCQEYFMDLYLLAELKTISLKVTTVDM 325
+I NG P +EL +KAS ID RR GA LFCQE++M+LY L E+ ++V TV++
Sbjct: 6 QIQSNGDPQSK-PLLELYVKASGIDARRIGADLFCQEFWMELYALYEIGVARVEVKTVNV 64
Query: 326 QKPPPDFRTNFEATLPPILI--DNGLAILENEKIERHIMKSVPGGH-NLFVQDKEVASLI 496
F+ NF PPI+I + L +N +IE I + LF +D I
Sbjct: 65 NSEA--FKKNFLGAQPPIMIEEEKELTYTDNREIEGRIFHLAKEFNVPLFEKDPSAEKRI 122
Query: 497 ENLYSKLKLVLVRKDE 544
ENLY KL L K E
Sbjct: 123 ENLYRNFKLFLRAKVE 138
>AL132876-18|CAD21669.2| 290|Caenorhabditis elegans Hypothetical
protein Y105E8A.22 protein.
Length = 290
Score = 79.8 bits (188), Expect = 1e-15
Identities = 53/136 (38%), Positives = 71/136 (52%), Gaps = 3/136 (2%)
Frame = +2
Query: 146 EIAENGTANGDVPEIELIIKASTIDGRRKGACLFCQEYFMDLYLLAELKTISLKVTTVDM 325
+I NG P +EL +KAS ID RR GA LFCQE++M+LY L E+ ++V TV++
Sbjct: 6 QIQSNGDPQSK-PLLELYVKASGIDARRIGADLFCQEFWMELYALYEIGVARVEVKTVNV 64
Query: 326 QKPPPDFRTNFEATLPPILI--DNGLAILENEKIERHIMKSVPGGH-NLFVQDKEVASLI 496
F+ NF PPI+I + L +N +IE I + LF +D I
Sbjct: 65 NSEA--FKKNFLGAQPPIMIEEEKELTYTDNREIEGRIFHLAKEFNVPLFEKDPSAEKRI 122
Query: 497 ENLYSKLKLVLVRKDE 544
ENLY KL L K E
Sbjct: 123 ENLYRNFKLFLRAKVE 138
>Z80223-7|CAB02316.2| 613|Caenorhabditis elegans Hypothetical
protein F26D10.9a protein.
Length = 613
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +2
Query: 263 MDLYLLAELKTISLKVTTVDMQKPPPDFRTNFEAT-LPPILIDNGLAILENEKIERHIMK 439
+ +Y+ + + + K+ K D T L +IDN A L+ +K + H+ K
Sbjct: 309 VQIYVESRDELVDKKIVLFSSLKDVEDLHVKATETGLLHYVIDNSFANLDEKKCQPHVAK 368
Query: 440 SVPGGHNLFVQDKEVA 487
V N Q EVA
Sbjct: 369 CVHDALNAAYQRHEVA 384
>Z81561-1|CAB04552.2| 550|Caenorhabditis elegans Hypothetical
protein K03D10.3 protein.
Length = 550
Score = 28.7 bits (61), Expect = 3.3
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = +2
Query: 251 QEYFMDLYLLAELKTISLKVTTVDMQKPPPDFRTN 355
+ Y ++ +++ +K + + +D +KPP + RTN
Sbjct: 38 KRYMVEKFIINTVKKVVAVIIHIDFRKPPQEVRTN 72
>Z70783-7|CAA94858.1| 239|Caenorhabditis elegans Hypothetical
protein ZK856.10 protein.
Length = 239
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2
Query: 182 PEIELIIKASTIDGRRKGACLFCQEYFMDLYLLAE 286
P ++ +I+A I R+G CL Q +F D+++ AE
Sbjct: 79 PFVDEVIEAKVIGSSRQGLCLTIQ-FFEDIFVPAE 112
>AL132948-33|CAD57708.2| 734|Caenorhabditis elegans Hypothetical
protein Y39B6A.43b protein.
Length = 734
Score = 27.5 bits (58), Expect = 7.6
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 470 QDKEVASLIENLYSKLKLVLVRKDEQKSAALRAHLGRIDGL 592
Q ++ ENL+ +LKL L+R++ Q A L R DGL
Sbjct: 650 QQSTSSTSAENLH-ELKLQLIRREMQNQDRFSAVLDRADGL 689
>AL132948-32|CAD31833.3| 731|Caenorhabditis elegans Hypothetical
protein Y39B6A.43a protein.
Length = 731
Score = 27.5 bits (58), Expect = 7.6
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 470 QDKEVASLIENLYSKLKLVLVRKDEQKSAALRAHLGRIDGL 592
Q ++ ENL+ +LKL L+R++ Q A L R DGL
Sbjct: 647 QQSTSSTSAENLH-ELKLQLIRREMQNQDRFSAVLDRADGL 686
>AC006794-2|AAK68505.2| 622|Caenorhabditis elegans Hypothetical
protein Y50D4A.4 protein.
Length = 622
Score = 27.5 bits (58), Expect = 7.6
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Frame = +2
Query: 302 LKVTTVD---MQKPPPDFRTNFEAT-LPPILIDNGLAILENEKIE 424
L VTT++ +PPP TNF T LP I+ID+ ++ + +++
Sbjct: 262 LVVTTIESHPQHQPPPALYTNFWFTFLPDIVIDSSGGVMYSIRLK 306
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,394,718
Number of Sequences: 27780
Number of extensions: 310531
Number of successful extensions: 877
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 877
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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