Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG1006
(528 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D31815-1|BAA06602.1| 299|Homo sapiens SMP-30 protein. 66 7e-11
BC073173-1|AAH73173.1| 299|Homo sapiens regucalcin (senescence ... 66 7e-11
AL513366-1|CAI41697.1| 299|Homo sapiens regucalcin (senescence ... 66 7e-11
AK223360-1|BAD97080.1| 299|Homo sapiens regucalcin variant prot... 66 7e-11
AB032064-1|BAA84082.1| 299|Homo sapiens regucalcin protein. 66 7e-11
AB028125-1|BAA78693.1| 299|Homo sapiens regucalcin protein. 66 7e-11
BC050371-1|AAH50371.1| 227|Homo sapiens RGN protein protein. 62 2e-09
CR749405-1|CAH18249.1| 313|Homo sapiens hypothetical protein pr... 33 0.82
DQ104251-1|AAZ32412.1| 323|Homo sapiens receptor for advanced g... 29 7.6
AY755623-1|AAX07276.1| 355|Homo sapiens receptor for advanced g... 29 7.6
>D31815-1|BAA06602.1| 299|Homo sapiens SMP-30 protein.
Length = 299
Score = 66.1 bits (154), Expect = 7e-11
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
Frame = +3
Query: 162 SVRIEKIT-EPLTLGEGPHWDERQQALYFVSIQDKTIHKYVPTTEKHTKTSLDGRVGFIL 338
S++IE + E GE P W+E +L FV I K + ++ T++ + ++D V +
Sbjct: 3 SIKIECVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVA 62
Query: 339 PVEGTTDQFVVGVERKFLFIQWDGEDGSKVAVLKELGEVDKDRPNNRINDGKADPRGR*F 518
+ + +V + KF + W + AV+ L VD D+ NNR NDGK DP GR F
Sbjct: 63 LRQ--SGGYVATIGTKFCALNWKEQS----AVV--LATVDNDKKNNRFNDGKVDPAGRYF 114
Query: 519 AGT 527
AGT
Sbjct: 115 AGT 117
>BC073173-1|AAH73173.1| 299|Homo sapiens regucalcin (senescence
marker protein-30) protein.
Length = 299
Score = 66.1 bits (154), Expect = 7e-11
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
Frame = +3
Query: 162 SVRIEKIT-EPLTLGEGPHWDERQQALYFVSIQDKTIHKYVPTTEKHTKTSLDGRVGFIL 338
S++IE + E GE P W+E +L FV I K + ++ T++ + ++D V +
Sbjct: 3 SIKIECVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVA 62
Query: 339 PVEGTTDQFVVGVERKFLFIQWDGEDGSKVAVLKELGEVDKDRPNNRINDGKADPRGR*F 518
+ + +V + KF + W + AV+ L VD D+ NNR NDGK DP GR F
Sbjct: 63 LRQ--SGGYVATIGTKFCALNWKEQS----AVV--LATVDNDKKNNRFNDGKVDPAGRYF 114
Query: 519 AGT 527
AGT
Sbjct: 115 AGT 117
>AL513366-1|CAI41697.1| 299|Homo sapiens regucalcin (senescence
marker protein-30) protein.
Length = 299
Score = 66.1 bits (154), Expect = 7e-11
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
Frame = +3
Query: 162 SVRIEKIT-EPLTLGEGPHWDERQQALYFVSIQDKTIHKYVPTTEKHTKTSLDGRVGFIL 338
S++IE + E GE P W+E +L FV I K + ++ T++ + ++D V +
Sbjct: 3 SIKIECVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVA 62
Query: 339 PVEGTTDQFVVGVERKFLFIQWDGEDGSKVAVLKELGEVDKDRPNNRINDGKADPRGR*F 518
+ + +V + KF + W + AV+ L VD D+ NNR NDGK DP GR F
Sbjct: 63 LRQ--SGGYVATIGTKFCALNWKEQS----AVV--LATVDNDKKNNRFNDGKVDPAGRYF 114
Query: 519 AGT 527
AGT
Sbjct: 115 AGT 117
>AK223360-1|BAD97080.1| 299|Homo sapiens regucalcin variant
protein.
Length = 299
Score = 66.1 bits (154), Expect = 7e-11
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
Frame = +3
Query: 162 SVRIEKIT-EPLTLGEGPHWDERQQALYFVSIQDKTIHKYVPTTEKHTKTSLDGRVGFIL 338
S++IE + E GE P W+E +L FV I K + ++ T++ + ++D V +
Sbjct: 3 SIKIECVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVA 62
Query: 339 PVEGTTDQFVVGVERKFLFIQWDGEDGSKVAVLKELGEVDKDRPNNRINDGKADPRGR*F 518
+ + +V + KF + W + AV+ L VD D+ NNR NDGK DP GR F
Sbjct: 63 LRQ--SGGYVATIGTKFCALNWKEQS----AVV--LATVDNDKKNNRFNDGKVDPAGRYF 114
Query: 519 AGT 527
AGT
Sbjct: 115 AGT 117
>AB032064-1|BAA84082.1| 299|Homo sapiens regucalcin protein.
Length = 299
Score = 66.1 bits (154), Expect = 7e-11
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
Frame = +3
Query: 162 SVRIEKIT-EPLTLGEGPHWDERQQALYFVSIQDKTIHKYVPTTEKHTKTSLDGRVGFIL 338
S++IE + E GE P W+E +L FV I K + ++ T++ + ++D V +
Sbjct: 3 SIKIECVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVA 62
Query: 339 PVEGTTDQFVVGVERKFLFIQWDGEDGSKVAVLKELGEVDKDRPNNRINDGKADPRGR*F 518
+ + +V + KF + W + AV+ L VD D+ NNR NDGK DP GR F
Sbjct: 63 LRQ--SGGYVATIGTKFCALNWKEQS----AVV--LATVDNDKKNNRFNDGKVDPAGRYF 114
Query: 519 AGT 527
AGT
Sbjct: 115 AGT 117
>AB028125-1|BAA78693.1| 299|Homo sapiens regucalcin protein.
Length = 299
Score = 66.1 bits (154), Expect = 7e-11
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
Frame = +3
Query: 162 SVRIEKIT-EPLTLGEGPHWDERQQALYFVSIQDKTIHKYVPTTEKHTKTSLDGRVGFIL 338
S++IE + E GE P W+E +L FV I K + ++ T++ + ++D V +
Sbjct: 3 SIKIECVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVA 62
Query: 339 PVEGTTDQFVVGVERKFLFIQWDGEDGSKVAVLKELGEVDKDRPNNRINDGKADPRGR*F 518
+ + +V + KF + W + AV+ L VD D+ NNR NDGK DP GR F
Sbjct: 63 LRQ--SGGYVATIGTKFCALNWKEQS----AVV--LATVDNDKKNNRFNDGKVDPAGRYF 114
Query: 519 AGT 527
AGT
Sbjct: 115 AGT 117
>BC050371-1|AAH50371.1| 227|Homo sapiens RGN protein protein.
Length = 227
Score = 61.7 bits (143), Expect = 2e-09
Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Frame = +3
Query: 162 SVRIEKIT-EPLTLGEGPHWDERQQALYFVSIQDKTIHKYVPTTEKHTKTSLDGRVGFIL 338
S++IE + E GE P W+E +L FV I K + ++ T++ + ++D V +
Sbjct: 3 SIKIECVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVA 62
Query: 339 PVEGTTDQFVVGVERKFLFIQWDGEDGSKVAVLKELGEVDKDRPNNRINDGKADPRGR*F 518
+ + +V + KF + W + AV+ L VD D+ NNR NDGK DP GR F
Sbjct: 63 LRQ--SGGYVATIGTKFCALNWKEQS----AVV--LATVDNDKKNNRFNDGKVDPAGRYF 114
Query: 519 A 521
A
Sbjct: 115 A 115
>CR749405-1|CAH18249.1| 313|Homo sapiens hypothetical protein
protein.
Length = 313
Score = 32.7 bits (71), Expect = 0.82
Identities = 24/76 (31%), Positives = 30/76 (39%)
Frame = +3
Query: 273 KYVPTTEKHTKTSLDGRVGFILPVEGTTDQFVVGVERKFLFIQWDGEDGSKVAVLKELGE 452
K V T K K L GF E +E + +F + G + KELG+
Sbjct: 158 KAVTTKIKTDKRDLIKLKGFCTAKETINRTNRQPIEWEKIFTNYASNKGLISRIYKELGQ 217
Query: 453 VDKDRPNNRINDGKAD 500
DK RPNN I D
Sbjct: 218 SDKQRPNNPIKKWAKD 233
>DQ104251-1|AAZ32412.1| 323|Homo sapiens receptor for advanced
glycation end-products protein.
Length = 323
Score = 29.5 bits (63), Expect = 7.6
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -3
Query: 418 PSSPSHCMKRNLRST-PTTNWSVVPSTGNMKPTL 320
PS H MK LR+ PT W +P+TG K L
Sbjct: 265 PSPQIHWMKDGLRTREPTAVWPPIPATGPRKAVL 298
>AY755623-1|AAX07276.1| 355|Homo sapiens receptor for advanced
glycosylation end-products deletion exon 8 and intron 9
v protein.
Length = 355
Score = 29.5 bits (63), Expect = 7.6
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -3
Query: 418 PSSPSHCMKRNLRST-PTTNWSVVPSTGNMKPTL 320
PS H MK LR+ PT W +P+TG K L
Sbjct: 265 PSPQIHWMKDGLRTREPTAVWPPIPATGPRKAVL 298
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,747,066
Number of Sequences: 237096
Number of extensions: 1590488
Number of successful extensions: 7111
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7101
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5103531180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -