Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1006
         (528 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68341-3|CAA92766.2|  269|Caenorhabditis elegans Hypothetical pr...    27   6.3  
Z81552-2|CAB04485.1|  331|Caenorhabditis elegans Hypothetical pr...    27   8.3  
Z81552-1|CAB04484.1|  331|Caenorhabditis elegans Hypothetical pr...    27   8.3  
X94702-1|CAA64363.1|  331|Caenorhabditis elegans pes-2 protein.        27   8.3  
X94701-1|CAA64362.1|  331|Caenorhabditis elegans pes-2 protein.        27   8.3  
U70853-8|AAB09145.3|  191|Caenorhabditis elegans Hypothetical pr...    27   8.3  
U70853-7|ABQ13066.1|  228|Caenorhabditis elegans Hypothetical pr...    27   8.3  

>Z68341-3|CAA92766.2|  269|Caenorhabditis elegans Hypothetical
           protein F01G4.5 protein.
          Length = 269

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = -3

Query: 310 LVFVCFSVVGTYLCIVLSWMLTKYSAC*RSSQWGPSPSVRGSVI 179
           L F CF    T LC +  + LT   +  R  +W P    + +VI
Sbjct: 141 LHFNCFDAYATKLCYLCYYTLTVLWSLVRGKKWNPLRERKDTVI 184


>Z81552-2|CAB04485.1|  331|Caenorhabditis elegans Hypothetical
           protein F56G4.3 protein.
          Length = 331

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
 Frame = +3

Query: 258 DKTIHKYVPTTEKHTKTSLDGRVG--FILPVE-GTTDQFVVGVERKF-LFIQWDGEDGSK 425
           +KTI+ + PTTEK  +T    +V   FI  +  G  +   +G E      I W  E    
Sbjct: 103 EKTINIFWPTTEKEDRTFAVMKVAEHFIYTLGLGEFESVTLGQENHAGRIIDWANEKNLN 162

Query: 426 VAVLKELGEVDKD 464
           +A    +G VDK+
Sbjct: 163 IANF-TIGNVDKE 174


>Z81552-1|CAB04484.1|  331|Caenorhabditis elegans Hypothetical
           protein F56G4.2 protein.
          Length = 331

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
 Frame = +3

Query: 258 DKTIHKYVPTTEKHTKTSLDGRVG--FILPVE-GTTDQFVVGVERKF-LFIQWDGEDGSK 425
           +KTI+ + PTTEK  +T    +V   FI  +  G  +   +G E      I W  E    
Sbjct: 103 EKTINIFWPTTEKEDRTFAVMKVAEHFIYTLGLGEFESVTLGQENHAGRIIDWANEKNLN 162

Query: 426 VAVLKELGEVDKD 464
           +A    +G VDK+
Sbjct: 163 IANF-TIGNVDKE 174


>X94702-1|CAA64363.1|  331|Caenorhabditis elegans pes-2 protein.
          Length = 331

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
 Frame = +3

Query: 258 DKTIHKYVPTTEKHTKTSLDGRVG--FILPVE-GTTDQFVVGVERKF-LFIQWDGEDGSK 425
           +KTI+ + PTTEK  +T    +V   FI  +  G  +   +G E      I W  E    
Sbjct: 103 EKTINIFWPTTEKEDRTFAVMKVAEHFIYTLGLGEFESVTLGQENHAGRIIDWANEKNLN 162

Query: 426 VAVLKELGEVDKD 464
           +A    +G VDK+
Sbjct: 163 IANF-TIGNVDKE 174


>X94701-1|CAA64362.1|  331|Caenorhabditis elegans pes-2 protein.
          Length = 331

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
 Frame = +3

Query: 258 DKTIHKYVPTTEKHTKTSLDGRVG--FILPVE-GTTDQFVVGVERKF-LFIQWDGEDGSK 425
           +KTI+ + PTTEK  +T    +V   FI  +  G  +   +G E      I W  E    
Sbjct: 103 EKTINIFWPTTEKEDRTFAVMKVAEHFIYTLGLGEFESVTLGQENHAGRIIDWANEKNLN 162

Query: 426 VAVLKELGEVDKD 464
           +A    +G VDK+
Sbjct: 163 IANF-TIGNVDKE 174


>U70853-8|AAB09145.3|  191|Caenorhabditis elegans Hypothetical
           protein M01H9.4a protein.
          Length = 191

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -2

Query: 326 NPPI*TGFCMFFSSWYIFVYSFI 258
           N PI T FC  FS +Y F+YS I
Sbjct: 161 NGPIDT-FCSIFSWFYTFIYSLI 182


>U70853-7|ABQ13066.1|  228|Caenorhabditis elegans Hypothetical
           protein M01H9.4b protein.
          Length = 228

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -2

Query: 326 NPPI*TGFCMFFSSWYIFVYSFI 258
           N PI T FC  FS +Y F+YS I
Sbjct: 198 NGPIDT-FCSIFSWFYTFIYSLI 219


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,873,004
Number of Sequences: 27780
Number of extensions: 247654
Number of successful extensions: 479
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 479
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)