Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG1005
(552 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17617| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_57691| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_6465| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_2383| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_27342| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_1204| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_58054| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_1546| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_13730| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_33624| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_18209| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.038
SB_18079| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.038
SB_6881| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.089
SB_26327| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.47
SB_15948| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.83
SB_492| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_13633| Best HMM Match : Glyco_hydro_31 (HMM E-Value=0) 29 3.3
SB_12062| Best HMM Match : NUC129 (HMM E-Value=9.2) 29 3.3
SB_51316| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_50608| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_34251| Best HMM Match : FA_hydroxylase (HMM E-Value=5.5) 29 3.3
SB_35396| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_24390| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_23259| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 7.7
>SB_17617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/33 (81%), Positives = 28/33 (84%)
Frame = +1
Query: 451 SWIVARRTSAKAFAKGVFINQERKLEVRRRLDT 549
SWI RRT+AKAFAK VFINQERKLE RRR DT
Sbjct: 4 SWIYERRTTAKAFAKNVFINQERKLEDRRRSDT 36
>SB_57691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 50.0 bits (114), Expect = 1e-06
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +1
Query: 466 RRTSAKAFAKGVFINQERKLEVRRRLDT 549
RRT+AKAFAK VFINQERKLE RRR DT
Sbjct: 9 RRTTAKAFAKNVFINQERKLEDRRRSDT 36
>SB_6465| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 50.0 bits (114), Expect = 1e-06
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +1
Query: 466 RRTSAKAFAKGVFINQERKLEVRRRLDT 549
RRT+AKAFAK VFINQERKLE RRR DT
Sbjct: 9 RRTTAKAFAKNVFINQERKLEDRRRSDT 36
>SB_2383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 50.0 bits (114), Expect = 1e-06
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +1
Query: 466 RRTSAKAFAKGVFINQERKLEVRRRLDT 549
RRT+AKAFAK VFINQERKLE RRR DT
Sbjct: 9 RRTTAKAFAKNVFINQERKLEDRRRSDT 36
>SB_27342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 50.0 bits (114), Expect = 1e-06
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +1
Query: 466 RRTSAKAFAKGVFINQERKLEVRRRLDT 549
RRT+AKAFAK VFINQERKLE RRR DT
Sbjct: 11 RRTTAKAFAKNVFINQERKLEDRRRSDT 38
>SB_1204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 48.0 bits (109), Expect = 5e-06
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = +1
Query: 469 RTSAKAFAKGVFINQERKLEVRRRLDT 549
RT+AKAFAK VFINQERKLE RRR DT
Sbjct: 2 RTTAKAFAKNVFINQERKLEDRRRSDT 28
>SB_58054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 48.0 bits (109), Expect = 5e-06
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = +1
Query: 469 RTSAKAFAKGVFINQERKLEVRRRLDT 549
RT+AKAFAK VFINQERKLE RRR DT
Sbjct: 29 RTTAKAFAKNVFINQERKLEDRRRSDT 55
>SB_1546| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +3
Query: 444 VKFLDRRKTNISESICQRCFHQSRTKV 524
VKFLD RKTN ESICQ CF K+
Sbjct: 2 VKFLDLRKTNYCESICQECFINQERKL 28
Score = 31.5 bits (68), Expect = 0.47
Identities = 16/29 (55%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +1
Query: 466 RRTS-AKAFAKGVFINQERKLEVRRRLDT 549
R+T+ ++ + FINQERKLE RRR DT
Sbjct: 8 RKTNYCESICQECFINQERKLEDRRRSDT 36
>SB_13730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +3
Query: 444 VKFLDRRKTNISESICQRCFHQSRTKV 524
VKFLD RKTN ESICQ CF K+
Sbjct: 2 VKFLDLRKTNYCESICQECFINQERKL 28
Score = 31.5 bits (68), Expect = 0.47
Identities = 16/29 (55%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +1
Query: 466 RRTS-AKAFAKGVFINQERKLEVRRRLDT 549
R+T+ ++ + FINQERKLE RRR DT
Sbjct: 8 RKTNYCESICQECFINQERKLEDRRRSDT 36
>SB_33624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 37.5 bits (83), Expect = 0.007
Identities = 19/29 (65%), Positives = 23/29 (79%), Gaps = 1/29 (3%)
Frame = +1
Query: 466 RRTS-AKAFAKGVFINQERKLEVRRRLDT 549
R+T+ ++ AK VFINQERKLE RRR DT
Sbjct: 8 RKTNYCESIAKNVFINQERKLEDRRRSDT 36
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 444 VKFLDRRKTNISESICQRCFHQSRTKV 524
VKFLD RKTN ESI + F K+
Sbjct: 2 VKFLDLRKTNYCESIAKNVFINQERKL 28
>SB_18209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 35.1 bits (77), Expect = 0.038
Identities = 19/39 (48%), Positives = 20/39 (51%)
Frame = +2
Query: 35 WRASLXXXXXXXXXXXXYTKIVAVKKLVVTFVRRAVGAP 151
WRASL Y K+VAVKKLVV F VG P
Sbjct: 64 WRASLVPAAAVIPAPIAYIKVVAVKKLVVGFRDGTVGPP 102
>SB_18079| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 35.1 bits (77), Expect = 0.038
Identities = 19/39 (48%), Positives = 20/39 (51%)
Frame = +2
Query: 35 WRASLXXXXXXXXXXXXYTKIVAVKKLVVTFVRRAVGAP 151
WRASL Y K+VAVKKLVV F VG P
Sbjct: 17 WRASLVPAAAVIPAPIAYIKVVAVKKLVVGFRDGTVGPP 55
>SB_6881| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 33.9 bits (74), Expect = 0.089
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +3
Query: 444 VKFLDRRKTNISESICQRCFHQSRTKV 524
VKFLD RKTN ESICQ F K+
Sbjct: 2 VKFLDLRKTNYCESICQDVFINQERKL 28
Score = 33.9 bits (74), Expect = 0.089
Identities = 17/29 (58%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Frame = +1
Query: 466 RRTS-AKAFAKGVFINQERKLEVRRRLDT 549
R+T+ ++ + VFINQERKLE RRR DT
Sbjct: 8 RKTNYCESICQDVFINQERKLEDRRRSDT 36
>SB_26327| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 31.5 bits (68), Expect = 0.47
Identities = 16/29 (55%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +1
Query: 466 RRTS-AKAFAKGVFINQERKLEVRRRLDT 549
R+T+ ++ + FINQERKLE RRR DT
Sbjct: 8 RKTNYCESICQECFINQERKLEDRRRSDT 36
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 447 KFLDRRKTNISESICQRCFHQSRTKV 524
+ L RKTN ESICQ CF K+
Sbjct: 3 EILGFRKTNYCESICQECFINQERKL 28
>SB_15948| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 30.7 bits (66), Expect = 0.83
Identities = 18/38 (47%), Positives = 19/38 (50%)
Frame = +2
Query: 38 RASLXXXXXXXXXXXXYTKIVAVKKLVVTFVRRAVGAP 151
RASL Y K+VAVKKLVV F VG P
Sbjct: 5 RASLVPAAAVIPAPIAYIKVVAVKKLVVGFRDGTVGPP 42
>SB_492| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = +2
Query: 29 EQWRASLXXXXXXXXXXXXYTKIVAVKKLVVTFVRRAVGAP 151
E+ ASL Y K+VAVKKLVV F VG P
Sbjct: 25 ERRAASLVPAAAVIPAPIAYIKVVAVKKLVVGFRDGTVGPP 65
>SB_13633| Best HMM Match : Glyco_hydro_31 (HMM E-Value=0)
Length = 663
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -1
Query: 336 RNIQAAFLARFEHSNLFK--VKLSAHLDTHRRAPR*DFDIEPAFFRTPAHRRYA 181
+N + LAR+ + +F ++ AHLDT RR P D+ R RYA
Sbjct: 573 KNPEPELLARWYQTGVFTPFLRAHAHLDTKRREPWLFDDVYKNVIRDALRTRYA 626
>SB_12062| Best HMM Match : NUC129 (HMM E-Value=9.2)
Length = 111
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +2
Query: 86 YTKIVAVKKLVVTFVRRAVGAP 151
Y K+VAVKKLVV F VG P
Sbjct: 88 YIKVVAVKKLVVGFRDGTVGPP 109
>SB_51316| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +2
Query: 86 YTKIVAVKKLVVTFVRRAVGAP 151
Y K+VAVKKLVV F VG P
Sbjct: 89 YIKVVAVKKLVVGFRDGTVGPP 110
>SB_50608| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +2
Query: 86 YTKIVAVKKLVVTFVRRAVGAP 151
Y K+VAVKKLVV F VG P
Sbjct: 17 YIKVVAVKKLVVGFRDGTVGPP 38
>SB_34251| Best HMM Match : FA_hydroxylase (HMM E-Value=5.5)
Length = 203
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -3
Query: 124 CNYELFNRNNFSIRYWSWNYRGCWH 50
C + RN +RYW W R C H
Sbjct: 91 CEVTVIARNILPVRYWIWLSRKCGH 115
>SB_35396| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 53
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 383 QNSEVMINRDNWGHSY-CDVRGEILGSSQDEHQRKHLP 493
Q EV +++ GH Y C GE++ S++D H+ +P
Sbjct: 7 QCKEVESSKEILGHPYVCAFAGEVIQSTEDVHKPSWIP 44
>SB_24390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -3
Query: 187 ICSANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYW-SWNY 65
I S S R+RCT S + KC + + F W S+NY
Sbjct: 139 ISSGYYGRSYRLRCTSSTSWKCRLTSISESYFKGNNWFSYNY 180
>SB_23259| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1449
Score = 27.5 bits (58), Expect = 7.7
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1
Query: 462 DDPRISPLTSQYEC 421
DDPR+SP + QY C
Sbjct: 241 DDPRVSPTSQQYAC 254
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,793,409
Number of Sequences: 59808
Number of extensions: 303029
Number of successful extensions: 821
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1276425465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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