Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG1003
(344 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 93 1e-20
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2... 72 3e-14
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 40 1e-04
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 40 1e-04
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 36 0.001
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 34 0.005
SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces p... 31 0.050
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 28 0.47
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 27 0.62
SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces pomb... 27 1.1
SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyc... 26 1.9
SPCC18.04 |pof6||F-box protein Pof6|Schizosaccharomyces pombe|ch... 24 7.6
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 24 7.6
SPAC664.14 |amt2||ammonium transporter Amt2|Schizosaccharomyces ... 24 7.6
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 92.7 bits (220), Expect = 1e-20
Identities = 49/113 (43%), Positives = 62/113 (54%)
Frame = +1
Query: 1 DKFKEISYAYEV*SDPKKRQVYDLYXXXXXXXXXXXXXFPADEIFGNCFGNLFXXXXXXX 180
DKFKEIS AYE+ +D +KR YD + AD++F + FG
Sbjct: 43 DKFKEISRAYEILADEEKRATYDRFGEEGLQGGGADGGMSADDLFASFFGG-----GMFG 97
Query: 181 XXXXXXPVRGEDTMHPLAVTLEDLYAGKTTKLQLSKNVICAHCTGVGGKPGSL 339
P +G+D +H + VTLEDLY GKTTKL L K VIC C+G GGK GS+
Sbjct: 98 GGMPRGPRKGKDLVHTIKVTLEDLYRGKTTKLALQKKVICPKCSGRGGKEGSV 150
>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 71.7 bits (168), Expect = 3e-14
Identities = 31/109 (28%), Positives = 52/109 (47%)
Frame = +1
Query: 1 DKFKEISYAYEV*SDPKKRQVYDLYXXXXXXXXXXXXXFPADEIFGNCFGNLFXXXXXXX 180
++F+ + AY++ DP+ R++YD+Y D++ FG F
Sbjct: 48 ERFRGVQEAYDILKDPESREMYDMYGMNSDSNSQFDGGVNLDDVLAQMFGMNFEAGGPGK 107
Query: 181 XXXXXXPVRGEDTMHPLAVTLEDLYAGKTTKLQLSKNVICAHCTGVGGK 327
RG D +H ++LED++ GK KL+ ++N +C C G GGK
Sbjct: 108 NVPRDRKRRGSDVIHDYEISLEDMFKGKEVKLRATRNTLCPRCQGRGGK 156
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 39.9 bits (89), Expect = 1e-04
Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 6/116 (5%)
Frame = +1
Query: 1 DKFKEISYAYEV*SDPKKRQVYDLY------XXXXXXXXXXXXXFPADEIFGNCFGNLFX 162
+KF EI+ A+EV SDP++R++YD Y FP + FG++F
Sbjct: 47 EKFIEINKAHEVLSDPEQRKIYDAYGEEGLNGQPGGPGGGPGEGFPGGGFGFDPFGDIFD 106
Query: 163 XXXXXXXXXXXXPVRGEDTMHPLAVTLEDLYAGKTTKLQLSKNVICAHCTGVGGKP 330
RG + + L Y G + L++ C+ C+G G P
Sbjct: 107 NIFGGRRRQNAVR-RGPSMEQIVQIHLSSFYTGGSFTLEIPVKRTCSVCSGQGFNP 161
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 39.9 bits (89), Expect = 1e-04
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +1
Query: 4 KFKEISYAYEV*SDPKKRQVYDLY 75
KFKEIS AYEV SDP++R++YD Y
Sbjct: 44 KFKEISLAYEVLSDPQRRKLYDQY 67
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 36.3 bits (80), Expect = 0.001
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +1
Query: 1 DKFKEISYAYEV*SDPKKRQVYDLY 75
DKF EI AYEV DPKK++ +D Y
Sbjct: 125 DKFVEIKQAYEVLQDPKKKKAFDTY 149
Score = 27.1 bits (57), Expect = 0.82
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +1
Query: 208 GEDTMHPLAVTLEDLYAGKTTKLQLSKNVICAHCTGVGGKPGS 336
GED + + + G L S + C+ C G G +PGS
Sbjct: 210 GEDIEASITIDFMEAVRGAKKDLSYSVSSTCSSCHGSGLQPGS 252
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 34.3 bits (75), Expect = 0.005
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +1
Query: 1 DKFKEISYAYEV*SDPKKRQVYD 69
+KF+ I +AYEV SDP K+++YD
Sbjct: 50 EKFQIIQHAYEVLSDPSKKEIYD 72
>SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 31.1 bits (67), Expect = 0.050
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +1
Query: 1 DKFKEISYAYEV*SDPKKRQVYD 69
+KF++++ AY+V SDPK R+ YD
Sbjct: 50 EKFQKLAEAYQVLSDPKLREKYD 72
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 27.9 bits (59), Expect = 0.47
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 1 DKFKEISYAYEV*SDPKKRQVYDLY 75
+KF++IS AY+V D K R YD +
Sbjct: 49 EKFQKISEAYQVLGDEKLRSQYDQF 73
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 27.5 bits (58), Expect = 0.62
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 4 KFKEISYAYEV*SDPKKRQVYD 69
+FKE+ AY + SDP+ R+ +D
Sbjct: 390 RFKEVGEAYTILSDPESRRRFD 411
>SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 775
Score = 26.6 bits (56), Expect = 1.1
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -2
Query: 154 GYQSNYQKFHQPET 113
G++SN +FHQPET
Sbjct: 203 GFESNSDEFHQPET 216
>SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 442
Score = 25.8 bits (54), Expect = 1.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 7 FKEISYAYEV*SDPKKRQVYD 69
FK I AYE+ SDP +R+ +D
Sbjct: 144 FKCIQKAYEILSDPVRRRQFD 164
>SPCC18.04 |pof6||F-box protein Pof6|Schizosaccharomyces pombe|chr
3|||Manual
Length = 872
Score = 23.8 bits (49), Expect = 7.6
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -2
Query: 217 YLRHGLDHGLDHILYSHPFQRGYQSN 140
+L+HG D ++H+ P +R + SN
Sbjct: 598 HLKHGFDRAIEHLSSFDP-RRDFSSN 622
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 23.8 bits (49), Expect = 7.6
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 178 LYSHPFQRGYQSNYQKFHQ 122
LYS P G +N QK+H+
Sbjct: 619 LYSDPTASGASNNLQKYHR 637
>SPAC664.14 |amt2||ammonium transporter Amt2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 512
Score = 23.8 bits (49), Expect = 7.6
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +2
Query: 65 MTYTGSKDYRKAAKEEGFRLMKFLVIALVTSLEWVG 172
+ YT R EE FR L + L TSL W G
Sbjct: 217 LAYTVCLGRRSKFVEEQFRPHSVLNVVLGTSLLWFG 252
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,345,178
Number of Sequences: 5004
Number of extensions: 23671
Number of successful extensions: 73
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 102111100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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