Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG1003
(344 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 1e-14
SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40) 43 6e-05
SB_34890| Best HMM Match : DnaJ (HMM E-Value=2.7e-37) 41 2e-04
SB_16146| Best HMM Match : DnaJ (HMM E-Value=2.7e-37) 41 2e-04
SB_39063| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 5e-04
SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38) 38 0.002
SB_3383| Best HMM Match : DnaJ (HMM E-Value=3.8e-40) 36 0.007
SB_293| Best HMM Match : DnaJ (HMM E-Value=7.6e-37) 34 0.027
SB_23942| Best HMM Match : 5-nucleotidase (HMM E-Value=4) 33 0.062
SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.062
SB_20922| Best HMM Match : RVT_1 (HMM E-Value=0) 32 0.11
SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.14
SB_43852| Best HMM Match : DnaJ (HMM E-Value=1.7e-37) 32 0.14
SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32) 32 0.14
SB_41006| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.33
SB_2261| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.58
SB_32622| Best HMM Match : Ank (HMM E-Value=2.2e-05) 29 1.3
SB_13496| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.3
SB_7748| Best HMM Match : DUF229 (HMM E-Value=4.5e-10) 27 4.1
SB_33836| Best HMM Match : PsbI (HMM E-Value=2) 27 5.4
SB_13699| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.1
SB_56552| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.4
SB_41210| Best HMM Match : MAAL_N (HMM E-Value=0.7) 26 9.4
SB_40035| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.4
SB_34639| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-25) 26 9.4
SB_33591| Best HMM Match : DnaJ (HMM E-Value=0.0056) 26 9.4
SB_20303| Best HMM Match : Trans_reg_C (HMM E-Value=0.38) 26 9.4
>SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 966
Score = 75.4 bits (177), Expect = 1e-14
Identities = 47/112 (41%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
Frame = +1
Query: 1 DKFKEISYAYEV*SDPKKRQVYDLYXXXXXXXXXXXXXFPAD-EIFGNCFGNLFXXXXXX 177
D+FK+IS AYEV SD KKR++YD F + +IF FG
Sbjct: 102 DRFKQISQAYEVLSDEKKRKIYDEGGEDAIKGGGEGGGFHSPMDIFDMFFGT-------- 153
Query: 178 XXXXXXXPVRGEDTMHPLAVTLEDLYAGKTTKLQLSKNVICAHCTGVGGKPG 333
RG+D +H L VTLE+LY G T +L L KNVIC+ C G GGK G
Sbjct: 154 GRAAHQGERRGKDMVHQLRVTLEELYNGATRQLALQKNVICSKCDGRGGKEG 205
>SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40)
Length = 351
Score = 43.2 bits (97), Expect = 6e-05
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = +1
Query: 1 DKFKEISYAYEV*SDPKKRQVYDLY 75
+KFKEIS AYEV SDPKK+++YD Y
Sbjct: 43 EKFKEISEAYEVLSDPKKKEIYDQY 67
>SB_34890| Best HMM Match : DnaJ (HMM E-Value=2.7e-37)
Length = 386
Score = 41.1 bits (92), Expect = 2e-04
Identities = 15/25 (60%), Positives = 23/25 (92%)
Frame = +1
Query: 1 DKFKEISYAYEV*SDPKKRQVYDLY 75
+KFK+I++AYE+ SDP+KR++YD Y
Sbjct: 42 EKFKDITFAYEILSDPEKRELYDRY 66
>SB_16146| Best HMM Match : DnaJ (HMM E-Value=2.7e-37)
Length = 79
Score = 41.1 bits (92), Expect = 2e-04
Identities = 15/25 (60%), Positives = 23/25 (92%)
Frame = +1
Query: 1 DKFKEISYAYEV*SDPKKRQVYDLY 75
+KFK+I++AYE+ SDP+KR++YD Y
Sbjct: 42 EKFKDITFAYEILSDPEKRELYDRY 66
>SB_39063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 39.9 bits (89), Expect = 5e-04
Identities = 16/25 (64%), Positives = 22/25 (88%)
Frame = +1
Query: 1 DKFKEISYAYEV*SDPKKRQVYDLY 75
+KFKEI+ AYEV SDP+KR+++D Y
Sbjct: 43 EKFKEIAEAYEVLSDPQKREIFDQY 67
>SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38)
Length = 161
Score = 37.9 bits (84), Expect = 0.002
Identities = 14/25 (56%), Positives = 22/25 (88%)
Frame = +1
Query: 1 DKFKEISYAYEV*SDPKKRQVYDLY 75
+KFKEIS AY+V +DP++R ++D+Y
Sbjct: 43 EKFKEISEAYKVLTDPRQRDIFDMY 67
>SB_3383| Best HMM Match : DnaJ (HMM E-Value=3.8e-40)
Length = 250
Score = 36.3 bits (80), Expect = 0.007
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +1
Query: 1 DKFKEISYAYEV*SDPKKRQVYDLY 75
+KFK++S AYEV SD +KR +YD Y
Sbjct: 45 EKFKKLSEAYEVLSDKEKRDIYDKY 69
>SB_293| Best HMM Match : DnaJ (HMM E-Value=7.6e-37)
Length = 238
Score = 34.3 bits (75), Expect = 0.027
Identities = 29/100 (29%), Positives = 40/100 (40%), Gaps = 1/100 (1%)
Frame = +1
Query: 1 DKFKEISYAYEV*SDPKKRQVYDLYXXXXXXXXXXXXXF-PADEIFGNCFGNLFXXXXXX 177
+KF +I AYEV +D +R++YD P FG FG F
Sbjct: 65 EKFHDIGAAYEVLADDDQRKIYDQRGEEGLKNAGHRDHSDPFSSFFGG-FG--FHFDGHN 121
Query: 178 XXXXXXXPVRGEDTMHPLAVTLEDLYAGKTTKLQLSKNVI 297
RG D L VTLE+LY G ++ + + I
Sbjct: 122 GHSHSQQVPRGSDLTVDLEVTLEELYNGNFIEVHVVREKI 161
>SB_23942| Best HMM Match : 5-nucleotidase (HMM E-Value=4)
Length = 735
Score = 33.1 bits (72), Expect = 0.062
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = -2
Query: 169 HPFQRGYQSNYQKFHQPETLLLGRLPVVL*ARISHTLVFS*DRITLHMRNLFL 11
HPFQRG+ ++FH P + +L +S V ++ +H R L +
Sbjct: 538 HPFQRGWYRRCERFHHPFSTVLNDFRETYLQYVSWKSVMDDKQLDIHFRTLII 590
>SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1084
Score = 33.1 bits (72), Expect = 0.062
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +1
Query: 1 DKFKEISYAYEV*SDPKKRQVYDLY 75
+KF+E+S AYEV SD KR+ YD +
Sbjct: 98 EKFQEVSEAYEVLSDDGKRKAYDSF 122
>SB_20922| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 576
Score = 32.3 bits (70), Expect = 0.11
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +1
Query: 1 DKFKEISYAYEV*SDPKKRQVYDLY 75
+KF+E++ AYEV SD KR+ YD +
Sbjct: 65 EKFREVAEAYEVLSDENKRRQYDQF 89
>SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 31.9 bits (69), Expect = 0.14
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +1
Query: 4 KFKEISYAYEV*SDPKKRQVYD 69
+FKE++ AY + SDPKK++ YD
Sbjct: 205 QFKEVNEAYSILSDPKKKRRYD 226
>SB_43852| Best HMM Match : DnaJ (HMM E-Value=1.7e-37)
Length = 399
Score = 31.9 bits (69), Expect = 0.14
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +1
Query: 4 KFKEISYAYEV*SDPKKRQVYDLY 75
KF++ + AY+V SDPKKR +Y+ +
Sbjct: 44 KFRQAAEAYDVLSDPKKRAIYNQF 67
>SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32)
Length = 264
Score = 31.9 bits (69), Expect = 0.14
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +1
Query: 4 KFKEISYAYEV*SDPKKRQVYD 69
+FKE++ AY + SDPKK++ YD
Sbjct: 205 QFKEVNEAYSILSDPKKKRRYD 226
>SB_41006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 725
Score = 30.7 bits (66), Expect = 0.33
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +1
Query: 1 DKFKEISYAYEV*SDPKKRQVYD 69
+ FKE+S AYEV DP++R+ +D
Sbjct: 41 ENFKEVSEAYEVLCDPQQRERFD 63
>SB_2261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 572
Score = 29.9 bits (64), Expect = 0.58
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 7 FKEISYAYEV*SDPKKRQVYD 69
F+EI AY+V SDP++R YD
Sbjct: 47 FREIQQAYDVLSDPQERAFYD 67
>SB_32622| Best HMM Match : Ank (HMM E-Value=2.2e-05)
Length = 509
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
Frame = +3
Query: 222 ASPCSDIRRFVCWENY---KIAAQQKRN-LCPLYRC 317
A PC +CWE Y KI + N LCP Y C
Sbjct: 222 ALPCGHEACCLCWERYLNVKIRDGEAHNILCPAYNC 257
>SB_13496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 83 KDYRKAAKEEGFRLMKFLVIALVTSLEWVGVEDVVKAVV 199
KD R+ + GFRL KF+ + V +E + VE+ K +V
Sbjct: 202 KDLRQTCAQGGFRLTKFVSNSRVV-METILVEEYAKQIV 239
>SB_7748| Best HMM Match : DUF229 (HMM E-Value=4.5e-10)
Length = 784
Score = 27.1 bits (57), Expect = 4.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -2
Query: 208 HGLDHGLDHILYSHPFQRGYQSNYQK 131
H D +L+SH F+RGYQ+ +Q+
Sbjct: 266 HSADSLGIQVLFSHFFERGYQTLFQE 291
>SB_33836| Best HMM Match : PsbI (HMM E-Value=2)
Length = 241
Score = 26.6 bits (56), Expect = 5.4
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 89 YRKAAKEEGFRLMKFLVIALVTSLEWVGVEDVVKAVVQSVAK 214
+RK + GF FL + V +W+ V+ +V+S A+
Sbjct: 57 FRKGHEYAGFCPSMFLYLLAVIPCDWITKRAVINCIVESKAQ 98
>SB_13699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 26.2 bits (55), Expect = 7.1
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +1
Query: 220 MHPLAVTLEDLYAGKTTKLQLSKNVICAHCT 312
+H +TL Y T + + +CAHCT
Sbjct: 320 VHATYITLHAPYVHTTRHVHHTTRTVCAHCT 350
>SB_56552| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 116
Score = 25.8 bits (54), Expect = 9.4
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -2
Query: 256 HTNLLMSLQGDAWYLRHGLD 197
+ N +++LQ D W+L GLD
Sbjct: 15 YKNNILALQADIWFLYKGLD 34
>SB_41210| Best HMM Match : MAAL_N (HMM E-Value=0.7)
Length = 536
Score = 25.8 bits (54), Expect = 9.4
Identities = 12/48 (25%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -3
Query: 147 KAITKNFISRKPSSLAAFL*SFEPV*VIHLSF-LRIGSHFICVTYFFK 7
K + K+ ++P S + + P+ + L+ + +G HF+ TYF +
Sbjct: 326 KLLWKDLTRQRPRSYSETRWQYFPILKLELAITIDVGEHFVKTTYFLE 373
>SB_40035| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 25.8 bits (54), Expect = 9.4
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 26 HMKCDPILRKDKCMTYTGSKDYRKAAK 106
HMKC + RK C T+T D R+A K
Sbjct: 354 HMKCVGLSRKPYCSTWT-CPDCRRANK 379
>SB_34639| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-25)
Length = 941
Score = 25.8 bits (54), Expect = 9.4
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 83 KDYRKAAKEEGFRLMKFLVIALVTSLEWVGVEDVVKAVV 199
K+ R+ + GFRL KF+ + V +E + VE+ K +V
Sbjct: 368 KNLRQTCAQGGFRLKKFVSNSRVV-METILVEEYAKQIV 405
>SB_33591| Best HMM Match : DnaJ (HMM E-Value=0.0056)
Length = 219
Score = 25.8 bits (54), Expect = 9.4
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 4 KFKEISYAYEV*SDPKKRQVYD 69
KF+ I+ AYE DP++R YD
Sbjct: 82 KFQLIATAYETLKDPEQRNDYD 103
>SB_20303| Best HMM Match : Trans_reg_C (HMM E-Value=0.38)
Length = 1354
Score = 25.8 bits (54), Expect = 9.4
Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +3
Query: 219 HASPCSDIRRFVCWENY--KIAAQQKRNL 299
H S C I +CW+ + + A+++R L
Sbjct: 840 HTSSCGHIMHSICWQGFYDSVVAKERRAL 868
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,085,437
Number of Sequences: 59808
Number of extensions: 172100
Number of successful extensions: 497
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 496
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 510674393
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -