Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG1003
(344 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain (... 77 3e-15
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 65 1e-11
Z47356-7|CAD31695.1| 249|Caenorhabditis elegans Hypothetical pr... 40 5e-04
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 36 0.008
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 36 0.008
Z66513-5|CAA91334.1| 331|Caenorhabditis elegans Hypothetical pr... 35 0.014
Z36238-2|CAA85274.1| 378|Caenorhabditis elegans Hypothetical pr... 33 0.055
U40415-10|AAK39254.1| 215|Caenorhabditis elegans Dnaj domain (p... 32 0.096
U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain (p... 29 0.68
Z81125-6|CAI79225.1| 234|Caenorhabditis elegans Hypothetical pr... 29 0.89
Z81125-5|CAB03381.2| 398|Caenorhabditis elegans Hypothetical pr... 29 0.89
AF408760-1|AAO27839.1| 318|Caenorhabditis elegans unknown prote... 29 0.89
Z75548-1|CAA99911.1| 776|Caenorhabditis elegans Hypothetical pr... 28 1.6
Z54216-2|CAA90945.1| 242|Caenorhabditis elegans Hypothetical pr... 28 2.1
AF025464-2|AAN84804.1| 496|Caenorhabditis elegans Prion-like-(q... 28 2.1
AF025464-1|AAN84805.1| 529|Caenorhabditis elegans Prion-like-(q... 28 2.1
Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical pr... 27 2.7
Z35663-8|CAA84728.1| 249|Caenorhabditis elegans Hypothetical pr... 27 2.7
U00058-4|AAD31932.3| 249|Caenorhabditis elegans Dnaj domain (pr... 27 2.7
U28929-4|AAA68347.3| 338|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z75547-3|CAA99902.1| 335|Caenorhabditis elegans Hypothetical pr... 27 4.8
Z78536-2|CAB01716.1| 363|Caenorhabditis elegans Hypothetical pr... 26 8.3
U80446-1|AAB37802.2| 1198|Caenorhabditis elegans Spindle defecti... 26 8.3
>AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 19 protein.
Length = 439
Score = 77.4 bits (182), Expect = 3e-15
Identities = 52/132 (39%), Positives = 66/132 (50%), Gaps = 21/132 (15%)
Frame = +1
Query: 1 DKFKEISYAYEV*SDPKKRQVYD---LYXXXXXXXXXXXXXFPA---------------- 123
DKFKEIS+AYEV S P+KR++YD L FP
Sbjct: 50 DKFKEISFAYEVLSSPEKRRLYDARGLEGVQGGGAGGGGGGFPGGLFSHFFGGAGGDDDD 109
Query: 124 --DEIFGNCFGNLFXXXXXXXXXXXXXPVRGEDTMHPLAVTLEDLYAGKTTKLQLSKNVI 297
D++ G+ FG LF + +DT+HPL VTLE+LY GKT+KL+LSK +
Sbjct: 110 DDDDMGGHPFGGLFGGMGGMGRGGPRRR-KFQDTVHPLNVTLEELYVGKTSKLKLSKKAL 168
Query: 298 CAHCTGVGGKPG 333
C C G GGK G
Sbjct: 169 CKTCEGSGGKKG 180
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 64.9 bits (151), Expect = 1e-11
Identities = 42/112 (37%), Positives = 55/112 (49%)
Frame = +1
Query: 1 DKFKEISYAYEV*SDPKKRQVYDLYXXXXXXXXXXXXXFPADEIFGNCFGNLFXXXXXXX 180
++FK+IS AYEV SD KKRQ+YD E F N F ++F
Sbjct: 43 EQFKQISQAYEVLSDEKKRQIYDQGGEEALQGGGG-----GGEGFHNPF-DVFDMFFGGG 96
Query: 181 XXXXXXPVRGEDTMHPLAVTLEDLYAGKTTKLQLSKNVICAHCTGVGGKPGS 336
R + T+H L VTL+ LY G T KL++S+ C C G+GG GS
Sbjct: 97 GRGGRGERRVKPTVHNLRVTLDTLYKGVTKKLKISRTATCKGCKGLGGNEGS 148
>Z47356-7|CAD31695.1| 249|Caenorhabditis elegans Hypothetical
protein T15H9.7 protein.
Length = 249
Score = 39.9 bits (89), Expect = 5e-04
Identities = 29/98 (29%), Positives = 44/98 (44%)
Frame = +1
Query: 1 DKFKEISYAYEV*SDPKKRQVYDLYXXXXXXXXXXXXXFPADEIFGNCFGNLFXXXXXXX 180
+KF+++S AYEV SD +KR +YD + D F + FG+ F
Sbjct: 64 EKFQDLSSAYEVLSDKEKRAMYDRHGEEGVAKMGGGGGGGHDP-FSSFFGDFFGGGGGHG 122
Query: 181 XXXXXXPVRGEDTMHPLAVTLEDLYAGKTTKLQLSKNV 294
+G D L VTLE++Y G +++ K V
Sbjct: 123 GEEGTP--KGADVTIDLFVTLEEVYNGHFVEIKRKKAV 158
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 35.9 bits (79), Expect = 0.008
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = +1
Query: 4 KFKEISYAYEV*SDPKKRQVYDLY 75
KF+EIS AYEV SD KRQ YD Y
Sbjct: 84 KFQEISEAYEVLSDDTKRQEYDAY 107
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 35.9 bits (79), Expect = 0.008
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = +1
Query: 4 KFKEISYAYEV*SDPKKRQVYDLY 75
KF+EIS AYEV SD KRQ YD Y
Sbjct: 84 KFQEISEAYEVLSDDTKRQEYDAY 107
>Z66513-5|CAA91334.1| 331|Caenorhabditis elegans Hypothetical
protein F54D5.8 protein.
Length = 331
Score = 35.1 bits (77), Expect = 0.014
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = +1
Query: 1 DKFKEISYAYEV*SDPKKRQVYDLY 75
+KFKEI+ AY+V SD KK+++YD +
Sbjct: 43 NKFKEIAEAYDVLSDDKKKKIYDQF 67
>Z36238-2|CAA85274.1| 378|Caenorhabditis elegans Hypothetical
protein R74.4 protein.
Length = 378
Score = 33.1 bits (72), Expect = 0.055
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +1
Query: 1 DKFKEISYAYEV*SDPKKRQVYDL 72
++FK++S AY V SDP KR+ YD+
Sbjct: 57 EEFKKVSIAYSVLSDPNKRRQYDV 80
>U40415-10|AAK39254.1| 215|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 14 protein.
Length = 215
Score = 32.3 bits (70), Expect = 0.096
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +1
Query: 1 DKFKEISYAYEV*SDPKKRQVYD 69
+ FKEI+YA V S+P KR+VYD
Sbjct: 79 EMFKEINYANAVLSNPNKRRVYD 101
>U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 8 protein.
Length = 813
Score = 29.5 bits (63), Expect = 0.68
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 4 KFKEISYAYEV*SDPKKRQVYDLY 75
+F EI+ AYEV SDP +++ YD +
Sbjct: 62 RFMEIAEAYEVLSDPLRKERYDRF 85
>Z81125-6|CAI79225.1| 234|Caenorhabditis elegans Hypothetical
protein T22A3.3b protein.
Length = 234
Score = 29.1 bits (62), Expect = 0.89
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 225 SPCSDIRRFVCWENYKIAAQQKRNLCPLYRC 317
SP + +R CWE+Y Q+ NL PL C
Sbjct: 159 SPGTWVRCHYCWESYVKLCQRVANLEPLISC 189
>Z81125-5|CAB03381.2| 398|Caenorhabditis elegans Hypothetical
protein T22A3.3a protein.
Length = 398
Score = 29.1 bits (62), Expect = 0.89
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 225 SPCSDIRRFVCWENYKIAAQQKRNLCPLYRC 317
SP + +R CWE+Y Q+ NL PL C
Sbjct: 323 SPGTWVRCHYCWESYVKLCQRVANLEPLISC 353
>AF408760-1|AAO27839.1| 318|Caenorhabditis elegans unknown protein
protein.
Length = 318
Score = 29.1 bits (62), Expect = 0.89
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 225 SPCSDIRRFVCWENYKIAAQQKRNLCPLYRC 317
SP + +R CWE+Y Q+ NL PL C
Sbjct: 243 SPGTWVRCHYCWESYVKLCQRVANLEPLISC 273
>Z75548-1|CAA99911.1| 776|Caenorhabditis elegans Hypothetical
protein R90.1 protein.
Length = 776
Score = 28.3 bits (60), Expect = 1.6
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 282 QQKRNLCPLYRCGRKTRFSYI 344
Q K++ C Y CGR +F+Y+
Sbjct: 72 QGKKHACKFYGCGRNDKFNYL 92
>Z54216-2|CAA90945.1| 242|Caenorhabditis elegans Hypothetical
protein T24H10.3 protein.
Length = 242
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +1
Query: 4 KFKEISYAYEV*SDPKKRQVYD 69
KF+ ++ AY++ SD +KR++YD
Sbjct: 59 KFQLLNKAYQILSDEEKRKIYD 80
>AF025464-2|AAN84804.1| 496|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 42,
isoform a protein.
Length = 496
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 178 LYSHPFQRGYQSNYQKFHQP 119
+YS+P Q+GYQ NYQ + P
Sbjct: 246 VYSNP-QQGYQQNYQNLYTP 264
>AF025464-1|AAN84805.1| 529|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 42,
isoform b protein.
Length = 529
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 178 LYSHPFQRGYQSNYQKFHQP 119
+YS+P Q+GYQ NYQ + P
Sbjct: 268 VYSNP-QQGYQQNYQNLYTP 286
>Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical
protein T03F6.2 protein.
Length = 510
Score = 27.5 bits (58), Expect = 2.7
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +1
Query: 4 KFKEISYAYEV*SDPKKRQVYD 69
+F+ + AY+V SDP++R+ YD
Sbjct: 70 QFRLLQAAYDVLSDPREREFYD 91
>Z35663-8|CAA84728.1| 249|Caenorhabditis elegans Hypothetical
protein T04A8.9 protein.
Length = 249
Score = 27.5 bits (58), Expect = 2.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 4 KFKEISYAYEV*SDPKKRQVYDL 72
KF +++ AYE+ S KR+ YD+
Sbjct: 66 KFHQVAMAYEILSSEDKRKAYDM 88
>U00058-4|AAD31932.3| 249|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 24 protein.
Length = 249
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 4 KFKEISYAYEV*SDPKKRQVYD 69
KFK+I+ AYE+ +D KKR D
Sbjct: 51 KFKKIAQAYEILTDKKKRADLD 72
>U28929-4|AAA68347.3| 338|Caenorhabditis elegans Hypothetical
protein F09C12.6 protein.
Length = 338
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 273 IAAQQKRNLCPLYRCGRKTRF 335
+ A +KRN+ LY CGRK F
Sbjct: 169 VIAYRKRNVKVLYYCGRKAAF 189
>Z75547-3|CAA99902.1| 335|Caenorhabditis elegans Hypothetical
protein R11D1.2 protein.
Length = 335
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +3
Query: 177 RMWSRPWSSPWRRYHASPCSDIRRFVCWE-NYKIAAQQKRN 296
R W W+ W + S + F C E +Y I A ++RN
Sbjct: 220 RKWRAGWTPKWESLYIKFWSFVNVFECVEGDYDIIATRQRN 260
>Z78536-2|CAB01716.1| 363|Caenorhabditis elegans Hypothetical
protein C07A4.3 protein.
Length = 363
Score = 25.8 bits (54), Expect = 8.3
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +1
Query: 118 PADEIFGNCFGNLF 159
PA+ IF NCFG+L+
Sbjct: 85 PAEHIFQNCFGSLW 98
>U80446-1|AAB37802.2| 1198|Caenorhabditis elegans Spindle defective
protein 5 protein.
Length = 1198
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 278 SSAKT*FVPTVQVWEENQVL 337
SSA +P +Q WEEN+ L
Sbjct: 53 SSADVRSIPIIQTWEENKAL 72
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,432,082
Number of Sequences: 27780
Number of extensions: 130682
Number of successful extensions: 356
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 356
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 451081596
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -