Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1002
         (451 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   2.3  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   2.3  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   2.3  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   3.1  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   3.1  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   3.1  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   3.1  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   3.1  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   3.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   5.4  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    20   9.4  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    20   9.4  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    20   9.4  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    20   9.4  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +1

Query: 70  STQELDDSAASKSPNSLEMPPKKFSGFRHENEPPI 174
           S + LDD  + KS    EMP     G  H+  P I
Sbjct: 88  SDKFLDDEMSKKSCQGCEMPSAGLCG-SHDEIPDI 121


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +1

Query: 70  STQELDDSAASKSPNSLEMPPKKFSGFRHENEPPI 174
           S + LDD  + KS    EMP     G  H+  P I
Sbjct: 36  SDKFLDDEMSKKSCQGCEMPSAGLCG-SHDEIPDI 69


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +1

Query: 70  STQELDDSAASKSPNSLEMPPKKFSGFRHENEPPI 174
           S + LDD  + KS    EMP     G  H+  P I
Sbjct: 219 SDKFLDDEMSKKSCQGCEMPSAGLCG-SHDEIPDI 252


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
 Frame = -1

Query: 451 DP*PICNSHSTQPIYTCRPTIHQT-QQLNSHTAPN 350
           D  P+C S +TQP  T    I Q    +  +  PN
Sbjct: 108 DTQPMCESLNTQPPVTSSSNILQNLADITPNVTPN 142


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
 Frame = -1

Query: 451 DP*PICNSHSTQPIYTCRPTIHQT-QQLNSHTAPN 350
           D  P+C S +TQP  T    I Q    +  +  PN
Sbjct: 108 DTQPMCESLNTQPPVTSSSNILQNLADITPNVTPN 142


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +1

Query: 157 ENEPPIKLLLFPFADTHPIRELAEFYKDFFNAPHLKL 267
           E  P + L +   A  + +RE  + + D F  P L L
Sbjct: 171 EKRPMVSLQVIK-AQIYSLRETVDVFNDIFGWPFLLL 206


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +1

Query: 157 ENEPPIKLLLFPFADTHPIRELAEFYKDFFNAPHLKL 267
           E  P + L +   A  + +RE  + + D F  P L L
Sbjct: 171 EKRPMVSLQVIK-AQIYSLRETVDVFNDIFGWPFLLL 206


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +1

Query: 157 ENEPPIKLLLFPFADTHPIRELAEFYKDFFNAPHLKL 267
           E  P + L +   A  + +RE  + + D F  P L L
Sbjct: 491 EKRPMVSLQVIK-AQIYSLRETVDVFNDIFGWPFLLL 526


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
 Frame = -1

Query: 451 DP*PICNSHSTQPIYTCRPTIHQT-QQLNSHTAPN 350
           D  P+C S +TQP  T    I Q    +  +  PN
Sbjct: 108 DTQPMCESLNTQPPVTSSSNILQNLADITPNVTPN 142


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +1

Query: 55  EIMSKSTQELDDSAASKSPNSLEMPPKKFSGF 150
           E+M+   + L+   A  + N L+   +KF  F
Sbjct: 322 ELMTSVVKSLESRYADLNENFLQCQDEKFESF 353


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = -1

Query: 331 WLVLRLLKQALSFCSIVLAHLSTSSV 254
           W++ R + +A+ F  + +AH S  ++
Sbjct: 136 WVLGREMCKAVPFVELTVAHASVLTI 161


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = -1

Query: 331 WLVLRLLKQALSFCSIVLAHLSTSSV 254
           W++ R + +A+ F  + +AH S  ++
Sbjct: 136 WVLGREMCKAVPFVELTVAHASVLTI 161


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 89  TVQHQRVRIL*RCH 130
           +  HQR RIL  CH
Sbjct: 274 STNHQRGRILGGCH 287


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +2

Query: 50  KRKSCLRAHKN*MTVQHQRVRIL*RCHQR 136
           K KS  +A ++   +QHQRV    R  QR
Sbjct: 80  KHKSRRKAPQSFEDIQHQRVMANVRERQR 108


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.316    0.134    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,955
Number of Sequences: 336
Number of extensions: 1996
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.1 bits)