Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG1002
(451 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.77
SB_30536| Best HMM Match : fn3 (HMM E-Value=0.079) 30 0.77
SB_54432| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10) 29 1.3
SB_58034| Best HMM Match : VWA (HMM E-Value=0) 29 1.3
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_12133| Best HMM Match : DUF827 (HMM E-Value=0.64) 29 1.3
SB_14156| Best HMM Match : Neuromodulin (HMM E-Value=1) 29 1.8
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 29 1.8
SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_29416| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19) 29 2.3
SB_17268| Best HMM Match : Ribosomal_L29 (HMM E-Value=1.7) 28 3.1
SB_25304| Best HMM Match : HDV_ag (HMM E-Value=0.55) 28 3.1
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 28 4.1
SB_31182| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_17350| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_3654| Best HMM Match : Ribosomal_L9_C (HMM E-Value=0.57) 28 4.1
SB_53805| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.4
SB_52409| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_32762| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 27 7.2
SB_8609| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_30484| Best HMM Match : Ded_cyto (HMM E-Value=0) 27 9.5
SB_4828| Best HMM Match : Peptidase_C48 (HMM E-Value=3e-06) 27 9.5
SB_3932| Best HMM Match : Spectrin (HMM E-Value=5.2e-17) 27 9.5
SB_37125| Best HMM Match : DUF1542 (HMM E-Value=0.76) 27 9.5
>SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3212
Score = 30.3 bits (65), Expect = 0.77
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 277 LTQSNKSLEPVLEDVELTNEDLSKDLELYENSVVEFDELLADMCRSA 417
L + N L+ L+D+ + NE+L LEL + + + LL +S+
Sbjct: 1981 LVEENAKLKVELKDINVENEELQSQLELTKEELTRVEALLETYRKSS 2027
>SB_30536| Best HMM Match : fn3 (HMM E-Value=0.079)
Length = 754
Score = 30.3 bits (65), Expect = 0.77
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = +1
Query: 292 KSLEPVLEDVELTNEDLSKDLELYENSVVEFDE----LLADMCRSAEWSGNYI*VMG 450
K+LE V+ + LT + L + LEL NSV + L +CR E N + VMG
Sbjct: 198 KALEGVVCHMILTRDRLCRKLELLNNSVTVCESNPSFLCIRLCRKLELLNNSVTVMG 254
>SB_54432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 199 DTHPIRELAEFYKDFFNAPHLKLTDELTQSNKSLEPVLEDVELTNEDLSKDL 354
D EL Y+ ++P +KL DE+++S ++ L +E KDL
Sbjct: 29 DAQKFLELHNKYRKIHDSPPMKLNDEMSKSAQAWADKLASMEKQQHSNEKDL 80
>SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10)
Length = 2155
Score = 29.5 bits (63), Expect = 1.3
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +1
Query: 238 DFFNAPHLKLTDELTQSNKSLEPVLEDVELTNEDLSKDLELYENSVVEFDELLADMCR 411
D + + +L +L+Q + L+ + EDV+ T E+L DLE V++ E LA+ R
Sbjct: 163 DDLRSKNEQLQRQLSQKDNQLQSMKEDVKNTEEELKLDLE----KVIQEKEDLAESFR 216
>SB_58034| Best HMM Match : VWA (HMM E-Value=0)
Length = 1203
Score = 29.5 bits (63), Expect = 1.3
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = +1
Query: 181 LLFPFADTHPIRELAEFYKDFFNAPHLKLTDELTQSNKSLEPVLED----VELTNEDLSK 348
LL+ F D ++ + + FF P L+ TQ ++ LE E+ E +LSK
Sbjct: 993 LLYDFVDIIRDNKMIDRTRRFFKRPKLRPLFSKTQLSR-LEKEFEEKRYLTETKRAELSK 1051
Query: 349 DLELYENSV 375
DLE+ E V
Sbjct: 1052 DLEMTETQV 1060
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 29.5 bits (63), Expect = 1.3
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Frame = +1
Query: 259 LKLTDEL--TQSNKS--LEPVLEDVELTNEDLSKDLELYENSVVEFDELLADM 405
LK TDE T K+ L PV DVE T E DL+ + V + DEL+AD+
Sbjct: 4071 LKNTDEAISTVEKKADKLSPVGTDVE-TIEQQMDDLKELQKEVEDIDELIADL 4122
>SB_12133| Best HMM Match : DUF827 (HMM E-Value=0.64)
Length = 325
Score = 29.5 bits (63), Expect = 1.3
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +1
Query: 262 KLTDELTQSNKSLEPVLEDVELTNEDLSKDLELYENSVVEFDELL 396
K+ ++L SN + ++ED + +D+S D + SV DEL+
Sbjct: 140 KIIEKLAASNTEKDRIIEDFAIALKDISADTSTADASVDVRDELM 184
>SB_14156| Best HMM Match : Neuromodulin (HMM E-Value=1)
Length = 462
Score = 29.1 bits (62), Expect = 1.8
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +1
Query: 31 PVSPVKEKEIMSKSTQELDDSAASKSPNSLEMPPKKFSGFRHENEP 168
P V K+ SKS EL +++ + SPN ++PPK+ + R+ P
Sbjct: 28 PACGVPLKDQCSKSETELTNASTTVSPND-QLPPKQTTEARYAPGP 72
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 29.1 bits (62), Expect = 1.8
Identities = 26/100 (26%), Positives = 44/100 (44%)
Frame = +1
Query: 43 VKEKEIMSKSTQELDDSAASKSPNSLEMPPKKFSGFRHENEPPIKLLLFPFADTHPIREL 222
VKE E M + S ASK E +K + HE +++++ D +R
Sbjct: 3246 VKEAEKMHNDLK----SEASKCSEKCEEFRRKIASLEHE----LRMVVQEKDDKERLRGE 3297
Query: 223 AEFYKDFFNAPHLKLTDELTQSNKSLEPVLEDVELTNEDL 342
A +DF KLT++L + ++L+ E+ E D+
Sbjct: 3298 AAGERDFLKQELAKLTNDLAEIQRALKYSEEEKEKLRNDM 3337
>SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1524
Score = 28.7 bits (61), Expect = 2.3
Identities = 23/92 (25%), Positives = 39/92 (42%)
Frame = +1
Query: 49 EKEIMSKSTQELDDSAASKSPNSLEMPPKKFSGFRHENEPPIKLLLFPFADTHPIRELAE 228
E + K ++ ++ + LE KK+ +R E EP +K L ++ L E
Sbjct: 552 EPDFDDKEQLDMLENELREVKQKLEGVEKKYQQYREEKEPELKSL------RDQVKNLGE 605
Query: 229 FYKDFFNAPHLKLTDELTQSNKSLEPVLEDVE 324
KD K D+L + K + ++ED E
Sbjct: 606 RLKD-AEFVKKKQLDDLKKLQKKYDQMVEDFE 636
>SB_29416| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 283 QSNKSLEPVLEDVELTNEDLSKDLELYENSVVEFDEL 393
Q L+ + + + L +EDL K LE YE D L
Sbjct: 39 QHESDLDSMQKRINLLSEDLDKTLEAYEEKKARLDSL 75
>SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)
Length = 3107
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +1
Query: 274 ELTQSNKSLEPVLEDVELTNEDLSKDLELYENSVVEFDELLADMCR 411
E+ + N E L+ L NE++ KDL + + + +E + M R
Sbjct: 1899 EMKRKNADYELALQSSNLENEEMQKDLVQQQMKITDLEEGMQRMLR 1944
>SB_17268| Best HMM Match : Ribosomal_L29 (HMM E-Value=1.7)
Length = 434
Score = 28.3 bits (60), Expect = 3.1
Identities = 21/112 (18%), Positives = 46/112 (41%)
Frame = +1
Query: 46 KEKEIMSKSTQELDDSAASKSPNSLEMPPKKFSGFRHENEPPIKLLLFPFADTHPIRELA 225
+++E+ +K Q LD + LE ++ + E E + +L FA+ I ++
Sbjct: 268 EQQEMENKIRQRLDLQETRRQ--QLEFKERRLLAEQEEEEEFRQKMLQKFAEDDRIEQMN 325
Query: 226 EFYKDFFNAPHLKLTDELTQSNKSLEPVLEDVELTNEDLSKDLELYENSVVE 381
+ H + ++L + + + EL + +E+Y +VE
Sbjct: 326 AQKRRMRQLEHKRAVEKLIEDRRMQFQQEREAELAARQEEERMEMYRRQIVE 377
>SB_25304| Best HMM Match : HDV_ag (HMM E-Value=0.55)
Length = 2153
Score = 28.3 bits (60), Expect = 3.1
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +1
Query: 1 PGCRNSARGLPVSPVKEKEIMSKSTQELDDSAASKSPNSLEMPPKKFSGFRHENEPPIKL 180
P C +SA P + K S STQ+ ++ S++ S+ P R EN L
Sbjct: 836 PKCSSSATTPPSKNARPKTTESSSTQQFKNNGDSRTSASITPSPYMLKMIR-ENLSTSSL 894
Query: 181 LLFP 192
L+ P
Sbjct: 895 LMTP 898
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 27.9 bits (59), Expect = 4.1
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +1
Query: 265 LTDELTQSN---KSLEPVLEDVELTNEDLSKDLELYENSVVEFDEL 393
L D+L Q+N LE VL +++ + LS + Y+N EF+ L
Sbjct: 1191 LQDQLNQANIKVSRLENVLGNLQKEKDILSNERNGYQNKAYEFENL 1236
>SB_31182| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1280
Score = 27.9 bits (59), Expect = 4.1
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +1
Query: 46 KEKEIMSKSTQELDDSAASKSPNSLEMPPKKFSGFRHENEPP 171
KE S S EL S SP E+PPK+ N PP
Sbjct: 985 KESASSSNSENELSVSPVPSSPPPPELPPKEKKVAEDTNCPP 1026
>SB_17350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2956
Score = 27.9 bits (59), Expect = 4.1
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 43 VKEKEIMSKSTQELDDSAASKSPNSLEMPPKKF 141
VK +E+ + LD++ ASK P + PP+++
Sbjct: 264 VKSQEVGRNTCTTLDNNGASKKPPLAQRPPQEY 296
>SB_3654| Best HMM Match : Ribosomal_L9_C (HMM E-Value=0.57)
Length = 247
Score = 27.9 bits (59), Expect = 4.1
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +1
Query: 250 APHLKLTDELTQSNKSLEPVLEDVELTNEDLSKDLELYENSVVEFDELLADM 405
AP+ + L ++ + E VL+ + T E + K + + ENSV +EL D+
Sbjct: 22 APNREFPILLKMASGATESVLQKISDTLERVEKRVRVIENSVACLEELRQDV 73
>SB_53805| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 27.5 bits (58), Expect = 5.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 91 SAASKSPNSLEMPPKKFSGFRHENEPP 171
++ K P S ++P K FRHE PP
Sbjct: 227 ASPDKRPTSFQVPMLKCDAFRHEFVPP 253
>SB_52409| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 27.1 bits (57), Expect = 7.2
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +1
Query: 19 ARGLPVSPVKEKEIMSKSTQELDDSAASKSPNSLEMPPKKFS--GFRHENEP 168
+RGLPVSP+ + + + A SK P K+ G EN+P
Sbjct: 127 SRGLPVSPISATRWVPEGQKHTHQKATSKDPQGKGPDIKQLGKYGEAVENDP 178
>SB_32762| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 830
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +1
Query: 37 SPVKEKEIMSKSTQELDDSAASKSPNSLEMPPKKFSGFRHENEPP 171
SPV +E + E + AS + N E+PP H + PP
Sbjct: 254 SPVTVQEAPPSTQTETETQQASTNRNRTEIPPLSSLIATHNHSPP 298
>SB_8609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 985
Score = 27.1 bits (57), Expect = 7.2
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 217 ELAEFYKDFFNAPHLKLTDELTQSN-KSLE-PVLEDVELTNEDLSKDLELYENSVVEFDE 390
E AE Y+D F + T+E N KS PV D E+TN++L + + S EFD
Sbjct: 910 ECAE-YQDSFECCRVPQTNEQDNGNIKSPPVPVPGDDEVTNDELMRVAASFFESGDEFDS 968
Query: 391 L 393
+
Sbjct: 969 M 969
>SB_30484| Best HMM Match : Ded_cyto (HMM E-Value=0)
Length = 1025
Score = 26.6 bits (56), Expect = 9.5
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +1
Query: 214 RELAEFYKDFFN--APHLKLTDELTQSNKSLEPVLEDVELTNEDLSKDLELYENSVVEFD 387
R + E + D N AP+ + L ++ + E VL+ + T E + K + + ENSV +
Sbjct: 204 RGVQEDHPDVKNLLAPNREFPILLKMASGATESVLQKICDTLERVEKRVRVIENSVACLE 263
Query: 388 ELLADM 405
EL D+
Sbjct: 264 ELRKDV 269
>SB_4828| Best HMM Match : Peptidase_C48 (HMM E-Value=3e-06)
Length = 512
Score = 26.6 bits (56), Expect = 9.5
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +1
Query: 232 YKDFFNAPHLKLTDELTQSNKSLEPVLEDVELTNEDLSKDLELYENSVVEFDELLADMCR 411
Y D+F + QS L V ++ LT ED+S L+ + VE DE++A + +
Sbjct: 28 YVDYFQQRSPHFIEAHDQSESLLFYVDQNAALTREDISFCLKDAYFTEVEQDEMIAVVTK 87
Query: 412 S 414
S
Sbjct: 88 S 88
>SB_3932| Best HMM Match : Spectrin (HMM E-Value=5.2e-17)
Length = 1426
Score = 26.6 bits (56), Expect = 9.5
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +1
Query: 214 RELAEFYK--DFFNAPHLKLTDELTQSNK-SLEPVLEDVELTNEDLSKDLEL 360
R+ AEF K D + K+TD +NK S +PV++DV + + KD L
Sbjct: 1243 RQNAEFKKVADDVTSKKRKVTDFDRFTNKLSADPVMDDVSRDHMKIEKDARL 1294
>SB_37125| Best HMM Match : DUF1542 (HMM E-Value=0.76)
Length = 580
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +1
Query: 283 QSNKSLEPVLEDVELTNEDLSKDLELYENSVVEFDELLADMCRSAE 420
+ NKS + + + ++ SK LE + +VEFD + D + +
Sbjct: 34 KKNKSEKDGKDQTKEEKKEWSKQLEFKKLDIVEFDRIFTDFANALD 79
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.134 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,214,136
Number of Sequences: 59808
Number of extensions: 242579
Number of successful extensions: 826
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 824
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 896151577
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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