Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1001
         (582 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_30169| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.8  
SB_38744| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.4  
SB_32537| Best HMM Match : Met_10 (HMM E-Value=8.4e-10)                28   6.4  
SB_40410| Best HMM Match : ANF_receptor (HMM E-Value=0)                27   8.5  
SB_45306| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.5  

>SB_30169| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 104

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 172 FLGTRTNHNKVLSMPSNCAVYSVTFSHH 89
           +L   T HN  + +PSNCA Y    + H
Sbjct: 58  YLCQTTAHNTTMPLPSNCAQYDHALAQH 85


>SB_38744| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 345

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 415 IQFNYIFIPALFLYCV-FYKKKKLYENSNNWHLIKIAFIQNIFM 543
           I FN + + A FL    FY   ++YE+ N+W ++  + +   F+
Sbjct: 232 ITFNIVILAAPFLLIWNFYYGIQVYESFNDWEMVTSSVLGEFFV 275


>SB_32537| Best HMM Match : Met_10 (HMM E-Value=8.4e-10)
          Length = 397

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = -2

Query: 179 GIFSGYKDK--SQQSFEHALKLCSV*CYIFT 93
           G+FSGY+DK  S  S    + L SV CY F+
Sbjct: 251 GLFSGYEDKFISSLSGSTLINLPSVHCYCFS 281


>SB_40410| Best HMM Match : ANF_receptor (HMM E-Value=0)
          Length = 888

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = +1

Query: 367 LFLLIRFVLTKVLQA*IQFNYIFIPALFLYCVFY--KKKKLYENSNNWHLIKIA 522
           +FLL R  ++ + Q  +    +++ +L L+C++Y  + + L EN N    I  +
Sbjct: 726 IFLLCRSYISIIGQVLLLLMLLYLTSLSLFCIYYAFRGRNLPENFNEARYISFS 779


>SB_45306| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1576

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 31   CLTISLYTFNTTTGIYGQRYDVKM*HYTLHNLRACSKLCC 150
            C+   + T  T  G  G++      H  + N+RAC KLCC
Sbjct: 1029 CMATKVLTDVTLKG--GKKAGKFKDHGDVKNMRACKKLCC 1066


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,796,606
Number of Sequences: 59808
Number of extensions: 364105
Number of successful extensions: 609
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1397989795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)