Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG1001
(582 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021491-1|CAA16373.2| 319|Caenorhabditis elegans Hypothetical ... 30 1.0
U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon gu... 30 1.4
AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein. 30 1.4
Z98860-2|CAB11545.1| 337|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z81062-1|CAB02945.2| 365|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z99942-9|CAB17073.3| 675|Caenorhabditis elegans Hypothetical pr... 27 7.4
AY652945-1|AAT73712.1| 675|Caenorhabditis elegans guanylate cyc... 27 7.4
AL132853-3|CAB60438.1| 859|Caenorhabditis elegans Hypothetical ... 27 7.4
AL008867-4|CAD56232.2| 675|Caenorhabditis elegans Hypothetical ... 27 7.4
Z83233-11|CAB05757.2| 292|Caenorhabditis elegans Hypothetical p... 27 9.7
Z73105-2|CAA97439.2| 803|Caenorhabditis elegans Hypothetical pr... 27 9.7
>AL021491-1|CAA16373.2| 319|Caenorhabditis elegans Hypothetical
protein Y44A6B.1 protein.
Length = 319
Score = 30.3 bits (65), Expect = 1.0
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +1
Query: 286 KNTLPTSHTYNIPLSDVFRILTIK*HFLFLLIRFVLTKVLQA*IQFNYIFIPALFLYCVF 465
KN LPT + YN+ +S I+ + F+ ++ +T A + N I P L + C F
Sbjct: 32 KNKLPTVYIYNMIISSSVDIIVM---FITFILPVTMTDEDYAAFR-NSILSPILTINCTF 87
Query: 466 YKKKKLY 486
+ + LY
Sbjct: 88 FYEHPLY 94
>U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon
guidance protein 2,isoform a protein.
Length = 2886
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -2
Query: 350 VRILNTSESGMLYVCDVGRVFFSLDFQREIIKTLIVHY 237
V+ N SE G+L VCD+ R S+D+ + L++H+
Sbjct: 1597 VQFFNKSEVGLLLVCDIIRTRCSVDWSESM--ALLLHF 1632
>AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein.
Length = 2914
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -2
Query: 350 VRILNTSESGMLYVCDVGRVFFSLDFQREIIKTLIVHY 237
V+ N SE G+L VCD+ R S+D+ + L++H+
Sbjct: 1625 VQFFNKSEVGLLLVCDIIRTRCSVDWSESM--ALLLHF 1660
>Z98860-2|CAB11545.1| 337|Caenorhabditis elegans Hypothetical
protein Y26G10.2 protein.
Length = 337
Score = 28.3 bits (60), Expect = 4.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 416 YNLITYLYRLCFYIVYFTKKKNY 484
+ L T+LY L +Y+V F KN+
Sbjct: 27 FGLFTFLYPLTYYVVLFKTPKNF 49
>Z81062-1|CAB02945.2| 365|Caenorhabditis elegans Hypothetical
protein F15A4.1 protein.
Length = 365
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 42 IFIHIQHNYRYLRPAV*CENV 104
IFIHI N+ YL P + C +
Sbjct: 285 IFIHIMENFIYLNPVIICSTL 305
>Z99942-9|CAB17073.3| 675|Caenorhabditis elegans Hypothetical
protein C46E1.2 protein.
Length = 675
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 291 HPTYIAHIQHSTFRCVQNPHNKVTLFVF 374
H Y A+++ +FRC NP +TL +
Sbjct: 110 HVVYKANLRGPSFRCEDNPDGTITLHYY 137
>AY652945-1|AAT73712.1| 675|Caenorhabditis elegans guanylate
cyclase-like protein protein.
Length = 675
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 291 HPTYIAHIQHSTFRCVQNPHNKVTLFVF 374
H Y A+++ +FRC NP +TL +
Sbjct: 110 HVVYKANLRGPSFRCEDNPDGTITLHYY 137
>AL132853-3|CAB60438.1| 859|Caenorhabditis elegans Hypothetical
protein Y80D3A.7 protein.
Length = 859
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = +3
Query: 255 FNYFPLKIQTKKHPTYIAHIQHSTFRCVQNPHNKVTLFVFANTF 386
F Y L P Y I++S CV+N + F+F F
Sbjct: 564 FTYSDLPAFLNSEPQYKPMIRYSESECVKNSEKCIESFIFTTGF 607
>AL008867-4|CAD56232.2| 675|Caenorhabditis elegans Hypothetical
protein C46E1.2 protein.
Length = 675
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 291 HPTYIAHIQHSTFRCVQNPHNKVTLFVF 374
H Y A+++ +FRC NP +TL +
Sbjct: 110 HVVYKANLRGPSFRCEDNPDGTITLHYY 137
>Z83233-11|CAB05757.2| 292|Caenorhabditis elegans Hypothetical
protein K06B4.9 protein.
Length = 292
Score = 27.1 bits (57), Expect = 9.7
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
Frame = +3
Query: 264 FPLKIQTKKHPTYIAHIQHSTFRCVQNPHNKVTLFVFANTFCT-------NQSFASLNTI 422
FPL+++ +I+H +T + N L + N FC Q F++ NT+
Sbjct: 62 FPLQVRYSPPMIHISHYVGNTCMTIYEISNLSHLLIALNRFCVLFFQHRYEQLFSNPNTV 121
Query: 423 *LHIYTGFVFILCIL 467
I +++I CI+
Sbjct: 122 ---IMRNYLWITCII 133
>Z73105-2|CAA97439.2| 803|Caenorhabditis elegans Hypothetical
protein R13.4 protein.
Length = 803
Score = 27.1 bits (57), Expect = 9.7
Identities = 10/50 (20%), Positives = 25/50 (50%)
Frame = -2
Query: 425 LNCI*ACKTLVSTKRISKNKKCYFIVRILNTSESGMLYVCDVGRVFFSLD 276
LNC+ + K + + + + KK + + +++N ++ Y C +F +
Sbjct: 490 LNCVLSKKRMFTPAKHHECKKIFDLAQLINANKGMTRYFCQTCNAYFKFE 539
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,748,729
Number of Sequences: 27780
Number of extensions: 294036
Number of successful extensions: 665
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 665
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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