Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1000
         (626 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    25   0.52 
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   8.4  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   8.4  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 25.0 bits (52), Expect = 0.52
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = +2

Query: 431 NETLISFKMESTEDEFYTICLNLTAEDPSFGNCNYTTDFEN 553
           +ET     +E    E + +CL  T   P F  CN   +  N
Sbjct: 401 DETWAKLGLEINHKEDFRVCLVFTLTGPFFTFCNVLMEMWN 441


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +1

Query: 88  CIHILKLFDWFRVESVSF 141
           CI++  L+ WF +  ++F
Sbjct: 43  CIYLTSLYIWFILTQMTF 60


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +1

Query: 88  CIHILKLFDWFRVESVSF 141
           CI++  L+ WF +  ++F
Sbjct: 43  CIYLTSLYIWFILTQMTF 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,317
Number of Sequences: 336
Number of extensions: 3067
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)