Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1000
         (626 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0389 - 13409848-13409964,13410049-13410114,13410209-134103...    31   0.99 
03_05_1156 - 30814037-30814190,30814277-30815166                       30   1.3  
08_01_1043 + 10565632-10565676,10565755-10565826,10566186-105662...    28   5.3  
01_01_0423 + 3198075-3199010                                           28   5.3  
09_04_0020 + 13837257-13837281,13837364-13837550,13837655-138377...    28   7.0  
01_05_0787 - 25215911-25216041,25216308-25216366,25218239-252183...    27   9.2  

>05_03_0389 -
           13409848-13409964,13410049-13410114,13410209-13410325,
           13410822-13410893,13410979-13411258,13411528-13411730,
           13412230-13412316,13412705-13412758,13413042-13413221,
           13414402-13414576,13414628-13414918,13414923-13415344
          Length = 687

 Score = 30.7 bits (66), Expect = 0.99
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 461 STEDEFYTICLNLTAEDPSFGNCNYTTDFENG 556
           S+  EFY +C N+    P  G   ++T+F NG
Sbjct: 129 SSFQEFYNVCRNICLSSPWDGQLAHSTEFYNG 160


>03_05_1156 - 30814037-30814190,30814277-30815166
          Length = 347

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +2

Query: 359 REKQEGTIEYQFWTNL*PSVVKFSNETLISFKME--STEDEFYTICLNLT 502
           R  +   I+Y+F+TN    V+   + T+  +K+E  S  D FY +C  +T
Sbjct: 174 RAIETNRIKYKFYTNALLLVLSIISGTVFLWKVEKLSLVDSFYCVCATIT 223


>08_01_1043 +
           10565632-10565676,10565755-10565826,10566186-10566289,
           10566482-10566574,10571044-10571183,10571297-10571427
          Length = 194

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -1

Query: 257 FTSRYKDVSCKRGSSA*TRIKKFTT*LTVNKTQ 159
           FTSRYK++  K  SS+   + KF   LT  + Q
Sbjct: 119 FTSRYKEILSKSHSSSMMTVPKFVPRLTKEEAQ 151


>01_01_0423 + 3198075-3199010
          Length = 311

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 14/54 (25%), Positives = 26/54 (48%)
 Frame = +2

Query: 341 TRLRCPREKQEGTIEYQFWTNL*PSVVKFSNETLISFKMESTEDEFYTICLNLT 502
           T  +  R    GT++ +++T L   +  F NET +  + E  + + Y +   LT
Sbjct: 74  TYFKASRNNLSGTLKEEWFTRLKSMITDFGNETSV-MEYEGDQKQIYQVTTVLT 126


>09_04_0020 +
           13837257-13837281,13837364-13837550,13837655-13837727,
           13837769-13837804,13838161-13838281,13838399-13838472,
           13838594-13838730,13839262-13839325,13839693-13839758,
           13840061-13840130,13840206-13840310,13840840-13840981,
           13841343-13841439,13841939-13842460
          Length = 572

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +2

Query: 446 SFKMESTEDEFYTICLNLTAEDPSFGNCNYTTDFENGELLEKVVSRVV 589
           + K+ +TE    + C++ T  DP   N N+  D   G   E V   V+
Sbjct: 467 NLKINATEKFIVSFCMDETENDPQKQNLNFGGDMPQGCRTEGVAEGVL 514


>01_05_0787 -
           25215911-25216041,25216308-25216366,25218239-25218336,
           25218521-25218831,25219298-25219402,25219831-25219886,
           25220029-25220105
          Length = 278

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
 Frame = +1

Query: 250 DVNKLGSGVQGKNRMGLLNISSGQ---ICNQV*N 342
           DV++LG   + K   GL N+SS     +CNQV N
Sbjct: 189 DVHRLGEYAESKMDEGLANLSSATDRCLCNQVKN 222


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,326,327
Number of Sequences: 37544
Number of extensions: 296584
Number of successful extensions: 675
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)