Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0999
(606 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0817 - 20792817-20793360,20794061-20794156,20795193-20795296 37 0.014
11_06_0690 + 26303733-26306540 34 0.10
09_06_0087 + 20771329-20771450,20771462-20771771,20771893-207726... 32 0.41
09_02_0546 - 10454404-10455687 31 0.71
12_02_0814 - 23410278-23411854,23411933-23412166,23412688-234127... 31 0.94
10_05_0023 + 8171023-8171782,8172658-8172950 31 0.94
05_03_0201 - 9762563-9762843,9763037-9763919,9763988-9764036,980... 31 0.94
04_01_0590 + 7793958-7794148,7794826-7794967,7799292-7800548 31 0.94
08_02_0168 - 13640894-13641973 30 1.2
08_02_1602 - 28148255-28149413,28151927-28152087 30 1.6
10_02_0188 - 6473353-6473432,6473619-6474816 29 2.9
05_01_0406 + 3197189-3197389,3197491-3197628,3198463-3198544,319... 29 2.9
04_04_1257 - 32155935-32156526,32156655-32157067 29 3.8
03_02_0263 - 6948618-6948818,6948909-6948971,6949078-6949146,694... 29 3.8
11_06_0152 + 20669949-20670326,20670887-20670997,20671079-206712... 28 5.0
04_01_0453 + 5869627-5870232,5870383-5870897,5870964-5871600 28 5.0
11_03_0006 + 8878611-8878724,8879323-8879706 28 6.6
04_03_1011 - 21708503-21708544,21708689-21708898,21709000-217091... 28 6.6
06_02_0347 - 14926801-14926821,14927615-14928529,14928530-149286... 27 8.7
06_01_0616 + 4467439-4467733,4469232-4469294,4469840-4471176,447... 27 8.7
05_01_0148 - 985745-986180,986290-986385,986498-986694,986824-98... 27 8.7
03_02_0609 - 9823120-9823573,9823903-9824102,9824240-9824335,982... 27 8.7
>10_08_0817 - 20792817-20793360,20794061-20794156,20795193-20795296
Length = 247
Score = 36.7 bits (81), Expect = 0.014
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = -2
Query: 314 YPTVQCFNCCRFGHTRVQCRSKPRCNKCG-GEHSGLACNTETFSCVNCRGE-HMATNKSC 141
+P C NC R GH C + C+ CG H C+++ C NC+ HMA SC
Sbjct: 36 FPNDLCNNCKRPGHFARDCPNVALCHACGLPGHIAAECSSKDL-CWNCKEPGHMA--NSC 92
Query: 140 P 138
P
Sbjct: 93 P 93
Score = 31.9 bits (69), Expect = 0.41
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = -2
Query: 299 CFNCCRFGHTRVQCRSKPRCNKC-GGEHSGLACNTETFSCVNCR-GEHMATNKSCPE 135
C NC + GH +C ++ CN C H C E C C H+A + CP+
Sbjct: 124 CSNCYKPGHLAAECTNEKACNNCRKSGHLARNCPNEPV-CNLCNVSGHLA--RECPK 177
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 10/79 (12%)
Frame = -2
Query: 299 CFNCCRFGHTRVQCRSKPRCNKCG-GEHSGLACNT------ETFSCVNC-RGEHMATNKS 144
C+NC GH C ++ C CG H C+ E C NC + H+A
Sbjct: 79 CWNCKEPGHMANSCPNEGICRNCGKSGHIARECSAPPMLPGEMRLCSNCYKPGHLAA--E 136
Query: 143 CPEFSRQTNIKK--HMSQN 93
C N +K H+++N
Sbjct: 137 CTNEKACNNCRKSGHLARN 155
>11_06_0690 + 26303733-26306540
Length = 935
Score = 33.9 bits (74), Expect = 0.10
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 302 QCFNCCRFGHTRVQCRSKPRCNKC 231
+CF C GH + C+ PRC +C
Sbjct: 93 RCFCCLGLGHLKADCKGAPRCYRC 116
>09_06_0087 +
20771329-20771450,20771462-20771771,20771893-20772672,
20772854-20774002
Length = 786
Score = 31.9 bits (69), Expect = 0.41
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -2
Query: 332 PVEQYIYPTVQCFNCCRFGHTRVQCRSKPRCNKC 231
P+ ++++ +CF C GH + C P C +C
Sbjct: 62 PIPRWLHG--RCFRCLGLGHLKASCSQPPTCYRC 93
>09_02_0546 - 10454404-10455687
Length = 427
Score = 31.1 bits (67), Expect = 0.71
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = -2
Query: 299 CFNCCRFGHTRVQCRSKPRCNKCGGEHSGLACNTETFSCVNCRG-EHMATNKSCPEFS 129
C C GH C S C C +H C T +C C G +H+ K C +FS
Sbjct: 203 CSRCGEIGHVASSCAST--CVHCEEDHPPDRCPTSRITCFFCEGTDHVP--KDC-QFS 255
>12_02_0814 -
23410278-23411854,23411933-23412166,23412688-23412725,
23412872-23412948
Length = 641
Score = 30.7 bits (66), Expect = 0.94
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = -2
Query: 299 CFNCCRFGHTRVQCRSKPRCNKC 231
CFNC GH + C RC C
Sbjct: 132 CFNCLGLGHQKSACPGSTRCYNC 154
>10_05_0023 + 8171023-8171782,8172658-8172950
Length = 350
Score = 30.7 bits (66), Expect = 0.94
Identities = 16/54 (29%), Positives = 20/54 (37%)
Frame = -2
Query: 299 CFNCCRFGHTRVQCRSKPRCNKCGGEHSGLACNTETFSCVNCRGEHMATNKSCP 138
C C GH C + C C +H C T +C C G +K CP
Sbjct: 213 CTRCGEIGHVASMCLTL--CTHCEEDHPPGECPTRKVTCFLCEGMGHFADK-CP 263
>05_03_0201 -
9762563-9762843,9763037-9763919,9763988-9764036,
9806710-9807680
Length = 727
Score = 30.7 bits (66), Expect = 0.94
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = -2
Query: 299 CFNCCRFGHTRVQCRSKPRCNKCGGEHSGLACNTETFSCVNCRG-EHMATNKSCPEFS 129
C C GH C + C C +H C T +C C G +H+ K C +FS
Sbjct: 193 CSRCGEIGHVASSCATT--CVHCEEDHPSDRCPTSRITCFFCEGTDHVP--KDC-QFS 245
>04_01_0590 + 7793958-7794148,7794826-7794967,7799292-7800548
Length = 529
Score = 30.7 bits (66), Expect = 0.94
Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = -2
Query: 299 CFNCCRFGHTRVQCRSKPRCNKCGGEHSGLACNTETFSCVNCRG-EHMATN 150
C C GH + C + C C +H C T +C C G H+ T+
Sbjct: 365 CPRCGEIGHVAIMCFTL--CPHCEEDHPPGECPTRKVTCFLCEGTNHVPTD 413
>08_02_0168 - 13640894-13641973
Length = 359
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 299 CFNCCRFGHTRVQCRSKPRCNKCGGEHSGLAC 204
CF C H R +CR +C+ C +H + C
Sbjct: 290 CFRCGD-AHRRTECRWAGKCSICSQDHKDVVC 320
>08_02_1602 - 28148255-28149413,28151927-28152087
Length = 439
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = -2
Query: 290 CCRFGHTRVQCRSKPRCNKCGGEHSGLACNTETFSCVNCRGEHMATNKSCPEFSRQTNIK 111
C + + R C CN+CG +H + + T +C G+H FSR+ +
Sbjct: 336 CAKNHYKRSHCPKMYVCNRCGRKHFSVLSDLRTHE-KHC-GDHRWLCSCGTSFSRKDKLI 393
Query: 110 KHMS 99
H+S
Sbjct: 394 GHVS 397
>10_02_0188 - 6473353-6473432,6473619-6474816
Length = 425
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = -2
Query: 299 CFNCCRFGHTRVQCRSKPRCNKCGGEHSGLACNTETFSCVNCRG-EHMATNKSCPEFS 129
C C GH C + C C +H C T +C C G +H+ K C +FS
Sbjct: 193 CSRCGEIGHVASSCATI--CVHCEEDHPPDRCPTSRITCFFCEGTDHVP--KDC-QFS 245
>05_01_0406 +
3197189-3197389,3197491-3197628,3198463-3198544,
3198658-3198734,3198829-3198935,3199367-3199505,
3200602-3200718,3200850-3200941,3201096-3201162,
3201249-3201355,3201468-3201546,3201751-3201894,
3202095-3202235
Length = 496
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = -2
Query: 305 VQCFNCCRFGHTRVQCRSKPRCNKCGGEHSGLACNTETFSCVN 177
V CF FGH V C++ G + A +F CVN
Sbjct: 324 VTCFVGLHFGHVLVHCKTSLTFASTTGSFTSNAIMATSFHCVN 366
>04_04_1257 - 32155935-32156526,32156655-32157067
Length = 334
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/44 (29%), Positives = 16/44 (36%)
Frame = -2
Query: 299 CFNCCRFGHTRVQCRSKPRCNKCGGEHSGLACNTETFSCVNCRG 168
C C GH C + C C +H C T +C C G
Sbjct: 170 CIRCGEIGHIASMCLTL--CAYCEEDHPPGECPTRKVTCFLCEG 211
>03_02_0263 -
6948618-6948818,6948909-6948971,6949078-6949146,
6949232-6949297,6949380-6949526,6949608-6949702,
6949845-6950016,6952187-6952318,6953581-6953674,
6954067-6954184,6955884-6957057
Length = 776
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 251 CSCIEHECVQSDNN*NIVPLDKYTVQLEYLKK 346
C C+ +C+ SD +IV DKYT Y++K
Sbjct: 394 CGCMMCKCIYSDQRKDIVLADKYTCG-NYMQK 424
>11_06_0152 +
20669949-20670326,20670887-20670997,20671079-20671280,
20671393-20671675,20672145-20672234,20672366-20672473,
20672595-20672975,20673250-20673324,20673685-20673797,
20676233-20676742,20676807-20677300
Length = 914
Score = 28.3 bits (60), Expect = 5.0
Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 5/63 (7%)
Frame = -2
Query: 404 TQTVVLTFDGQSLP-SRVYSFFSSIPVEQYIYP----TVQCFNCCRFGHTRVQCRSKPRC 240
T VLT DG +P S + + +Y P CFNC GH V C + R
Sbjct: 139 TAQSVLTEDGPDVPLSDNIVLRKLLRIPRYFDPGETLLETCFNCGEEGHVAVNCPMEKRK 198
Query: 239 NKC 231
C
Sbjct: 199 RPC 201
>04_01_0453 + 5869627-5870232,5870383-5870897,5870964-5871600
Length = 585
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Frame = -2
Query: 299 CFNCCRFGHTRVQCRSKPRCNKCGGE-HSGLAC 204
CF C GH C SK C C E H C
Sbjct: 274 CFRCLTKGHIMQDCSSKFYCEICESEDHIATRC 306
>11_03_0006 + 8878611-8878724,8879323-8879706
Length = 165
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +1
Query: 163 CSPLQLTQEKVSVLQASPLCS 225
C P+QLT VSVL S LCS
Sbjct: 145 CHPVQLTAIVVSVLMRSSLCS 165
>04_03_1011 -
21708503-21708544,21708689-21708898,21709000-21709112,
21709232-21709349,21709386-21709412,21709671-21709808,
21710069-21710194,21710279-21710467,21710598-21710885,
21710937-21711024,21711120-21711298
Length = 505
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = -3
Query: 298 VSIVVA--LDTLVFNAGANLDVINVVESTADWLVILRLFLVLTVEVNIWLQ 152
V +VVA +D +VFN+G N+ ++E A W R F ++ E+ + LQ
Sbjct: 366 VKVVVADNIDDIVFNSGKNV----LLEFYAPWCGHCRKFALILEEIAVSLQ 412
>06_02_0347 -
14926801-14926821,14927615-14928529,14928530-14928634,
14928698-14929003
Length = 448
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = -2
Query: 440 KSVNSDGTSWIPTQTVVLTFDGQSLPSRVYSFFSSIPVEQYIYPTVQCFNCCRFGHTRVQ 261
KS + +PT + L G+++ S + SS Q ++CF C GH + +
Sbjct: 279 KSSSRGANRSLPTSSKQLDVKGKAVSSSQPT--SSTAATQRKTSKIECFKCGGHGHKQAE 336
Query: 260 CRSK 249
C ++
Sbjct: 337 CPNR 340
>06_01_0616 +
4467439-4467733,4469232-4469294,4469840-4471176,
4472719-4473086,4473526-4473559,4473978-4474421
Length = 846
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -2
Query: 455 RRLNRKSVNSDGTSWIPTQTVVLTFDGQSLPSRVYSFFSSIPVEQYIYPTVQ 300
RR + + S+G +WI T V DG S P + + + Y+ PT Q
Sbjct: 282 RRASVAGMMSEGYAWIATAGVGAAADGLS-PDDIEHMQGVVSLRPYVQPTGQ 332
>05_01_0148 -
985745-986180,986290-986385,986498-986694,986824-986919,
987020-987059,987751-987857
Length = 323
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = -2
Query: 308 TVQCFNCCRFGHTRVQCRS---KPRCNKCG 228
T +CFNC GH C++ K +C +CG
Sbjct: 101 TGRCFNCGIDGHWARDCKAGDWKNKCYRCG 130
>03_02_0609 -
9823120-9823573,9823903-9824102,9824240-9824335,
9824454-9824567,9824711-9824774,9825206-9825312
Length = 344
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = -2
Query: 308 TVQCFNCCRFGHTRVQCRS---KPRCNKCG 228
T +CFNC GH C++ K +C +CG
Sbjct: 148 TGRCFNCGIDGHWARDCKAGDWKNKCYRCG 177
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,392,751
Number of Sequences: 37544
Number of extensions: 364793
Number of successful extensions: 1058
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1442939384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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