Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0999
(606 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 40 0.001
AL032651-1|CAB60580.1| 681|Caenorhabditis elegans Hypothetical ... 33 0.21
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 32 0.37
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 32 0.37
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 31 0.48
U97593-1|AAB52875.1| 715|Caenorhabditis elegans Hypothetical pr... 31 0.64
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 31 0.64
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 31 0.64
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 31 0.64
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 31 0.64
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 31 0.64
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 31 0.64
Z81481-3|CAB03949.1| 1496|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr... 30 1.1
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical... 30 1.1
AF125462-6|AAD12857.2| 239|Caenorhabditis elegans Hypothetical ... 30 1.1
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 29 1.9
U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related... 29 1.9
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 29 1.9
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 29 1.9
AC025716-11|AAK39605.1| 823|Caenorhabditis elegans Yeast mcm (l... 29 1.9
Z81070-11|CAB03006.3| 1086|Caenorhabditis elegans Hypothetical p... 29 2.6
U58740-1|AAB00611.1| 1073|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF160248-1|AAD45518.1| 860|Caenorhabditis elegans ribonuclease ... 29 2.6
U64845-12|AAC48025.1| 475|Caenorhabditis elegans Hypothetical p... 29 3.4
Z81487-4|CAB03998.2| 420|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z70212-6|CAA94166.1| 336|Caenorhabditis elegans Hypothetical pr... 28 4.5
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 28 4.5
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 28 4.5
Z50863-1|CAA90736.3| 353|Caenorhabditis elegans Hypothetical pr... 28 5.9
M77697-7|AAA27902.6| 903|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z81473-7|CAB60992.2| 661|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z81063-8|CAB61013.2| 661|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z80215-6|CAD56562.2| 1052|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z80215-5|CAB02273.3| 1049|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z78200-8|CAB01583.2| 368|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical p... 27 7.9
Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical p... 27 7.9
AF492701-1|AAM49753.1| 647|Caenorhabditis elegans SPE-9 protein. 27 7.9
AF492700-1|AAM49752.1| 647|Caenorhabditis elegans SPE-9 protein. 27 7.9
AF492699-1|AAM49751.1| 647|Caenorhabditis elegans SPE-9 protein. 27 7.9
AF492698-1|AAM49750.1| 647|Caenorhabditis elegans SPE-9 protein. 27 7.9
AF492697-1|AAM49749.1| 647|Caenorhabditis elegans SPE-9 protein. 27 7.9
AF492696-1|AAM49748.1| 647|Caenorhabditis elegans SPE-9 protein. 27 7.9
AF492695-1|AAM49747.1| 647|Caenorhabditis elegans SPE-9 protein. 27 7.9
AF492694-1|AAM49746.1| 647|Caenorhabditis elegans SPE-9 protein. 27 7.9
AF492693-1|AAM49745.1| 647|Caenorhabditis elegans SPE-9 protein. 27 7.9
AF492692-1|AAM49744.1| 647|Caenorhabditis elegans SPE-9 protein. 27 7.9
AF492690-1|AAM49742.1| 647|Caenorhabditis elegans SPE-9 protein. 27 7.9
AF492688-1|AAM49741.1| 647|Caenorhabditis elegans SPE-9 protein. 27 7.9
AF492687-1|AAM49740.1| 647|Caenorhabditis elegans SPE-9 protein. 27 7.9
AF492686-1|AAM49739.1| 647|Caenorhabditis elegans SPE-9 protein. 27 7.9
AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication l... 27 7.9
AF049327-1|AAC38980.1| 661|Caenorhabditis elegans sperm transme... 27 7.9
>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
protein R52.2 protein.
Length = 1019
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -2
Query: 299 CFNCCRFGHTRVQCRSKPR-CNKCGGEHSGLACNT 198
CF C R GH R +C S+PR CN C G H + C +
Sbjct: 348 CFGCLRSGHQRSKC-SRPRTCNHCKGNHHTVFCQS 381
>AL032651-1|CAB60580.1| 681|Caenorhabditis elegans Hypothetical
protein Y6D1A.1 protein.
Length = 681
Score = 32.7 bits (71), Expect = 0.21
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -2
Query: 320 YIYPTVQCFNCCRFGHTRVQCRSKPRCNKCGGEHSGLACNTETFS-CVNCRGE 165
Y + QCF + R RC +C G HS C + F+ C+ C+ E
Sbjct: 272 YRHSVDQCFKFINVNNRRKALIMAGRCTRCLGRHSFKDCRSAKFNVCMYCKDE 324
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 31.9 bits (69), Expect = 0.37
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = -2
Query: 299 CFNCCRFGHTRVQCRSKPR-CNKCG 228
CFNC ++GH +C + R C CG
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCG 228
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 31.9 bits (69), Expect = 0.37
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = -2
Query: 299 CFNCCRFGHTRVQCRSKPR-CNKCG 228
CFNC ++GH +C + R C CG
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCG 228
>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
protein C34F6.1 protein.
Length = 1043
Score = 31.5 bits (68), Expect = 0.48
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = -2
Query: 281 FGHTRVQCRSKPRCNKCGGE-HSGLACNTETFSCVNCRGEHMATNKSCPEFSRQTNIKKH 105
F H V+ C K G LA T FS R + + C +FS + +K
Sbjct: 649 FCHIGVEGSENYCCPKHGDPCQQALATGTGGFSIT--RYYYDKETRRCRDFSYEG--QKG 704
Query: 104 MSQNLISYQEASKLFPILVPNSCSPGDPL 18
+ N ++ ++ + P+L PN CS G+PL
Sbjct: 705 NANNFLTLEDCGLVCPVL-PNPCSLGEPL 732
>U97593-1|AAB52875.1| 715|Caenorhabditis elegans Hypothetical
protein C46G7.3 protein.
Length = 715
Score = 31.1 bits (67), Expect = 0.64
Identities = 26/83 (31%), Positives = 32/83 (38%), Gaps = 17/83 (20%)
Frame = -2
Query: 323 QYIYPTVQCF---NC--CRFGHTRVQC-----------RSKPRCNKCGGE-HSGLACNTE 195
QY +P + NC C GHT ++C + RC C GE HS C +
Sbjct: 607 QYTFPVNRQMMDRNCQICGVGHTLLRCPLASFEVRRFIANDNRCAVCAGERHSSSMCYS- 665
Query: 194 TFSCVNCRGEHMATNKSCPEFSR 126
T C C G H EF R
Sbjct: 666 TLKCTYCSGRHHPAGCRLKEFYR 688
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 31.1 bits (67), Expect = 0.64
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = -2
Query: 305 VQCFNCCRFGHTRVQCRSKPR-CNKCGGE-HSGLAC 204
++CFNC GH +C PR C CG + H C
Sbjct: 242 MKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 277
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -2
Query: 299 CFNCCRFGHTRVQC--RSKPRCNKCGGEHSG 213
C+NC + GHT +C KPR + GG G
Sbjct: 185 CYNCQQPGHTSRECTEERKPREGRTGGFGGG 215
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 31.1 bits (67), Expect = 0.64
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = -2
Query: 305 VQCFNCCRFGHTRVQCRSKPR-CNKCGGE-HSGLAC 204
++CFNC GH +C PR C CG + H C
Sbjct: 453 MKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 31.1 bits (67), Expect = 0.64
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = -2
Query: 305 VQCFNCCRFGHTRVQCRSKPR-CNKCGGE-HSGLAC 204
++CFNC GH +C PR C CG + H C
Sbjct: 453 MKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 31.1 bits (67), Expect = 0.64
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = -2
Query: 305 VQCFNCCRFGHTRVQCRSKPR-CNKCGGE-HSGLAC 204
++CFNC GH +C PR C CG + H C
Sbjct: 242 MKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 277
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -2
Query: 299 CFNCCRFGHTRVQC--RSKPRCNKCGGEHSG 213
C+NC + GHT +C KPR + GG G
Sbjct: 185 CYNCQQPGHTSRECTEERKPREGRTGGFGGG 215
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 31.1 bits (67), Expect = 0.64
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = -2
Query: 305 VQCFNCCRFGHTRVQCRSKPR-CNKCGGE-HSGLAC 204
++CFNC GH +C PR C CG + H C
Sbjct: 242 MKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 277
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -2
Query: 299 CFNCCRFGHTRVQC--RSKPRCNKCGGEHSG 213
C+NC + GHT +C KPR + GG G
Sbjct: 185 CYNCQQPGHTSRECTEERKPREGRTGGFGGG 215
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 31.1 bits (67), Expect = 0.64
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = -2
Query: 305 VQCFNCCRFGHTRVQCRSKPR-CNKCGGE-HSGLAC 204
++CFNC GH +C PR C CG + H C
Sbjct: 453 MKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488
>Z81481-3|CAB03949.1| 1496|Caenorhabditis elegans Hypothetical
protein C38D9.3 protein.
Length = 1496
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -2
Query: 299 CFNCCRFGHTRVQCRSKPRCNKCGGEHSGLAC 204
C NC H +CRS C C G+H AC
Sbjct: 731 CANCLNPHHDIKKCRSYRSCAYCMGKHHSGAC 762
>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -2
Query: 299 CFNCCRFGHTRVQCRSKPRCNKCGGEHSGLAC 204
C NC H +CRS C C G+H AC
Sbjct: 692 CANCLNPHHDIEKCRSYRSCAYCMGKHHSGAC 723
>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -2
Query: 299 CFNCCRFGHTRVQCRSKPRCNKCGGEHSGLAC 204
C NC H +CRS C C G+H AC
Sbjct: 692 CANCLNPHHDIEKCRSYRSCAYCMGKHHSGAC 723
>AF125462-6|AAD12857.2| 239|Caenorhabditis elegans Hypothetical
protein Y66H1A.2 protein.
Length = 239
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Frame = -2
Query: 605 MSMNPLYNVVIPTYN------ICKMGLIKGIPQEWTHEDIVDNLQIPEGYGQIIK 459
M+ P Y++++PTYN IC + LI+ +E +HE I+ + P+G I K
Sbjct: 1 MTSTPKYSIILPTYNEKENLPIC-IWLIENYLKEVSHEVIIVDDASPDGTQGIAK 54
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -2
Query: 245 RCNKCGGEHSGLACNTETFSCVNCRGEHMATNKSC 141
RC KC + C+ T C+NCR H T C
Sbjct: 770 RCEKCDCHGNSEECDPFTGECLNCR--HNTTGSRC 802
>U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related.
see also lmb-protein 2 protein.
Length = 1535
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -2
Query: 302 QCFNCCRFGHTRVQCRSKPRCNKCGGEHSGLACNTETFSCVNCR 171
+C C G+T S C+K GE NT F+C NC+
Sbjct: 816 ECVECACSGNT--DPNSIGNCDKITGECKKCIFNTHGFNCENCK 857
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Frame = -2
Query: 263 QCRSKP-----RCNKCGGEHSGLACNTETFSCVNCRGEHMAT-NKSCPEFSRQTNIKKHM 102
QC+ KP RC++C H G + N C C E++ + N+ C S Q K+++
Sbjct: 949 QCQCKPGVTGQRCDRCADYHFGFSAN----GCQPCDCEYIGSENQQCDVNSGQCLCKENV 1004
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -2
Query: 245 RCNKCGGEHSGLACNTETFSCVNCRGEHMATNKSC 141
RC KC + C+ T C+NCR H T C
Sbjct: 770 RCEKCDCHGNSEECDPFTGECLNCR--HNTTGSRC 802
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -2
Query: 245 RCNKCGGEHSGLACNTETFSCVNCRGEHMATNKSC 141
RC KC + C+ T C+NCR H T C
Sbjct: 770 RCEKCDCHGNSEECDPFTGECLNCR--HNTTGSRC 802
>AC025716-11|AAK39605.1| 823|Caenorhabditis elegans Yeast mcm
(licensing factor) relatedprotein 4 protein.
Length = 823
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/57 (21%), Positives = 31/57 (54%)
Frame = -3
Query: 367 FPLECIPFFQVFQLNSIFIQRYNVSIVVALDTLVFNAGANLDVINVVESTADWLVIL 197
+P + IP+ + +N +F +R+N ++ +++ FNA ++ + + D L+ +
Sbjct: 193 YPADVIPYLDIV-VNEVFAERFNRTLAQSIELRPFNAQKTRNMRGLNPNDVDQLITI 248
>Z81070-11|CAB03006.3| 1086|Caenorhabditis elegans Hypothetical
protein F26E4.10 protein.
Length = 1086
Score = 29.1 bits (62), Expect = 2.6
Identities = 21/77 (27%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Frame = -2
Query: 317 IYPTVQCFNCCRFGHTRVQCRSKPRCNKCGGEHSGLACNTETFSCVNCRGE--HMATNKS 144
I+P + FN G+ +CR CG +H A + C GE H T +
Sbjct: 257 IHPDIS-FNEKGLGNEGPECRCPEPIKTCGLKHGYYAGEDKAIDCKKSNGENLHYYTLRV 315
Query: 143 CPEFSRQTNIKKHMSQN 93
P S + HM+ N
Sbjct: 316 TPLPSENQLYRTHMAIN 332
>U58740-1|AAB00611.1| 1073|Caenorhabditis elegans Hypothetical
protein R09H3.1 protein.
Length = 1073
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -2
Query: 344 FSSIPVEQYIYPTVQCFNCCRFGHTRVQCRSKPRCNKCGGEH 219
F+S Q I C C H QC+S +C C G H
Sbjct: 536 FTSKQFRQAIRDKNLCAICLVRNHHTQQCKSNRKCTYCAGAH 577
>AF160248-1|AAD45518.1| 860|Caenorhabditis elegans ribonuclease
protein.
Length = 860
Score = 29.1 bits (62), Expect = 2.6
Identities = 21/77 (27%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Frame = -2
Query: 317 IYPTVQCFNCCRFGHTRVQCRSKPRCNKCGGEHSGLACNTETFSCVNCRGE--HMATNKS 144
I+P + FN G+ +CR CG +H A + C GE H T +
Sbjct: 31 IHPDIS-FNEKGLGNEGPECRCPEPIKTCGLKHGYYAGEDKAIDCKKSNGENLHYYTLRV 89
Query: 143 CPEFSRQTNIKKHMSQN 93
P S + HM+ N
Sbjct: 90 TPLPSENQLYRTHMAIN 106
>U64845-12|AAC48025.1| 475|Caenorhabditis elegans Hypothetical
protein F45F2.1 protein.
Length = 475
Score = 28.7 bits (61), Expect = 3.4
Identities = 27/82 (32%), Positives = 34/82 (41%), Gaps = 8/82 (9%)
Frame = +3
Query: 105 MFFNICLSTKLRARFVCSHMFTSTVNTRKSLSITSQS---AVLSTTFITSRFAPALNTSV 275
MF ICL + RF CS F L TSQS +V+ T + A A S
Sbjct: 386 MFLKICLPLVVFFRFHCSVCFAEIWKVYYHLIPTSQSSRQSVIENTTLDDPTASATPISA 445
Query: 276 SKATTIETL-----YRWINILF 326
+ ET+ YR +N LF
Sbjct: 446 EVLISSETIETNGGYRDLNELF 467
>Z81487-4|CAB03998.2| 420|Caenorhabditis elegans Hypothetical
protein C54E10.5 protein.
Length = 420
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 429 VDRLPV*STGFDNLSIAFWDLQIIY-NVLMSPLLRDTLYQTHFTYIICR 572
+D V GF+ + F I Y ++++ P L L +T TYI+C+
Sbjct: 280 IDYSNVSDHGFERFNNVFGGKMIRYFDIIVKPYLELNLSETEVTYILCQ 328
>Z70212-6|CAA94166.1| 336|Caenorhabditis elegans Hypothetical
protein R04D3.8 protein.
Length = 336
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/72 (23%), Positives = 34/72 (47%)
Frame = -3
Query: 481 KAMDKLSNPVD*TGSLSTQMELHGFLLKLWS*LLTDSLFPLECIPFFQVFQLNSIFIQRY 302
+ ++ L+ +D + TQ + L + S + T + FP+ C+ F+ V I Q+Y
Sbjct: 223 RILNLLNKHLDASSRTKTQHKSFVLGLTIQSAIPTFTYFPMYCMYFYCVTTKTEILFQQY 282
Query: 301 NVSIVVALDTLV 266
+ + AL +
Sbjct: 283 FIYLASALPVFI 294
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 28.3 bits (60), Expect = 4.5
Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 2/73 (2%)
Frame = -2
Query: 314 YPTVQCFNCCRFGHTRVQCRSKPRCNKCGGEHSGLACNTETFSCVNCRGEHMATNKSCPE 135
Y +C CR G+ V C K C C+ T SC C ++ CP+
Sbjct: 617 YTGEKCEQICRNGYWGVDCAHKCSCK---------LCDPSTGSC-RCEDPEKCSDGPCPD 666
Query: 134 --FSRQTNIKKHM 102
+ Q N+K M
Sbjct: 667 GFYGSQCNLKCRM 679
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 8/49 (16%)
Frame = -2
Query: 302 QCFNCCRFGHTRVQCRSK-------PRCNK-CGGEHSGLACNTETFSCV 180
+CF C+ GH+ C+S P CN+ C E+ G+ C++ T SCV
Sbjct: 1314 KCF--CKPGHSGSDCKSGCVQGRFGPDCNQLCSCENGGV-CDSSTGSCV 1359
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 28.3 bits (60), Expect = 4.5
Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 2/73 (2%)
Frame = -2
Query: 314 YPTVQCFNCCRFGHTRVQCRSKPRCNKCGGEHSGLACNTETFSCVNCRGEHMATNKSCPE 135
Y +C CR G+ V C K C C+ T SC C ++ CP+
Sbjct: 617 YTGEKCEQICRNGYWGVDCAHKCSCK---------LCDPSTGSC-RCEDPEKCSDGPCPD 666
Query: 134 --FSRQTNIKKHM 102
+ Q N+K M
Sbjct: 667 GFYGSQCNLKCRM 679
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 8/49 (16%)
Frame = -2
Query: 302 QCFNCCRFGHTRVQCRSK-------PRCNK-CGGEHSGLACNTETFSCV 180
+CF C+ GH+ C+S P CN+ C E+ G+ C++ T SCV
Sbjct: 1314 KCF--CKPGHSGSDCKSGCVQGRFGPDCNQLCSCENGGV-CDSSTGSCV 1359
>Z50863-1|CAA90736.3| 353|Caenorhabditis elegans Hypothetical
protein C14H10.1 protein.
Length = 353
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 385 VKTTV*VGIHEVPSELTDFLFNLR 456
+ TT+ + +HE+P E++DF LR
Sbjct: 239 IMTTITILLHEIPHEISDFAILLR 262
>M77697-7|AAA27902.6| 903|Caenorhabditis elegans Hypothetical
protein B0303.11 protein.
Length = 903
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +1
Query: 319 YCSTGILEKKEYTLEGRDCPSKVKTTV*VGIHEVPSE 429
YCS + ++E +G +CP + ++V +HE+ E
Sbjct: 433 YCSLLYIIRRERNEDGEECPKSMYSSVLEQMHELQQE 469
>Z81473-7|CAB60992.2| 661|Caenorhabditis elegans Hypothetical
protein C17D12.6 protein.
Length = 661
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 191 FSCVNCRGEHMATNKSCPEFSRQTNIKKHMSQN 93
F C+ C H K+C S QTN +KH+ QN
Sbjct: 76 FYCI-CPVTHYG--KTCEHVSDQTNCEKHLCQN 105
>Z81063-8|CAB61013.2| 661|Caenorhabditis elegans Hypothetical
protein C17D12.6 protein.
Length = 661
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 191 FSCVNCRGEHMATNKSCPEFSRQTNIKKHMSQN 93
F C+ C H K+C S QTN +KH+ QN
Sbjct: 76 FYCI-CPVTHYG--KTCEHVSDQTNCEKHLCQN 105
>Z80215-6|CAD56562.2| 1052|Caenorhabditis elegans Hypothetical
protein C36B1.8b protein.
Length = 1052
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 248 PRCNKCGGEHSGLACNTETFSCVNCRGEH 162
P C+ CGG H+ C +T ++ +G+H
Sbjct: 917 PSCSNCGGPHAPKHCEKQTL--LSKKGDH 943
>Z80215-5|CAB02273.3| 1049|Caenorhabditis elegans Hypothetical
protein C36B1.8a protein.
Length = 1049
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 248 PRCNKCGGEHSGLACNTETFSCVNCRGEH 162
P C+ CGG H+ C +T ++ +G+H
Sbjct: 914 PSCSNCGGPHAPKHCEKQTL--LSKKGDH 940
>Z78200-8|CAB01583.2| 368|Caenorhabditis elegans Hypothetical
protein T04H1.6 protein.
Length = 368
Score = 27.5 bits (58), Expect = 7.9
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Frame = -2
Query: 296 FNCCRFG----HTRVQCRSKPRCNKCGGEHSGLACNTETFSCVNCRGEH-MATNKSC 141
F CC H +C P C E++ +C + F+CV + EH + NK C
Sbjct: 213 FACCAMPQSCIHVSKRCDGHPDCADGEDENNCPSCARDEFACV--KSEHCIPANKRC 267
>Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical
protein ZK632.1a protein.
Length = 810
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -2
Query: 176 CRGEHMATNKSCPEFSRQTNIKKHMSQNLISYQEASKL 63
C H+AT +C E RQ KK + +L + +K+
Sbjct: 85 CEALHLATLDACDESERQQMFKKQLYVSLFNLDAKTKV 122
>Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical
protein ZK632.1a protein.
Length = 810
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -2
Query: 176 CRGEHMATNKSCPEFSRQTNIKKHMSQNLISYQEASKL 63
C H+AT +C E RQ KK + +L + +K+
Sbjct: 85 CEALHLATLDACDESERQQMFKKQLYVSLFNLDAKTKV 122
>AF492701-1|AAM49753.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 191 FSCVNCRGEHMATNKSCPEFSRQTNIKKHMSQN 93
F C+ C H K+C S QTN +KH+ QN
Sbjct: 62 FYCI-CPVTHYG--KTCEHVSDQTNCEKHLCQN 91
>AF492700-1|AAM49752.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 191 FSCVNCRGEHMATNKSCPEFSRQTNIKKHMSQN 93
F C+ C H K+C S QTN +KH+ QN
Sbjct: 62 FYCI-CPVTHYG--KTCEHVSDQTNCEKHLCQN 91
>AF492699-1|AAM49751.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 191 FSCVNCRGEHMATNKSCPEFSRQTNIKKHMSQN 93
F C+ C H K+C S QTN +KH+ QN
Sbjct: 62 FYCI-CPVTHYG--KTCEHVSDQTNCEKHLCQN 91
>AF492698-1|AAM49750.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 191 FSCVNCRGEHMATNKSCPEFSRQTNIKKHMSQN 93
F C+ C H K+C S QTN +KH+ QN
Sbjct: 62 FYCI-CPVTHYG--KTCEHVSDQTNCEKHLCQN 91
>AF492697-1|AAM49749.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 191 FSCVNCRGEHMATNKSCPEFSRQTNIKKHMSQN 93
F C+ C H K+C S QTN +KH+ QN
Sbjct: 62 FYCI-CPVTHYG--KTCEHVSDQTNCEKHLCQN 91
>AF492696-1|AAM49748.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 191 FSCVNCRGEHMATNKSCPEFSRQTNIKKHMSQN 93
F C+ C H K+C S QTN +KH+ QN
Sbjct: 62 FYCI-CPVTHYG--KTCEHVSDQTNCEKHLCQN 91
>AF492695-1|AAM49747.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 191 FSCVNCRGEHMATNKSCPEFSRQTNIKKHMSQN 93
F C+ C H K+C S QTN +KH+ QN
Sbjct: 62 FYCI-CPVTHYG--KTCEHVSDQTNCEKHLCQN 91
>AF492694-1|AAM49746.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 191 FSCVNCRGEHMATNKSCPEFSRQTNIKKHMSQN 93
F C+ C H K+C S QTN +KH+ QN
Sbjct: 62 FYCI-CPVTHYG--KTCEHVSDQTNCEKHLCQN 91
>AF492693-1|AAM49745.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 191 FSCVNCRGEHMATNKSCPEFSRQTNIKKHMSQN 93
F C+ C H K+C S QTN +KH+ QN
Sbjct: 62 FYCI-CPVTHYG--KTCEHVSDQTNCEKHLCQN 91
>AF492692-1|AAM49744.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 191 FSCVNCRGEHMATNKSCPEFSRQTNIKKHMSQN 93
F C+ C H K+C S QTN +KH+ QN
Sbjct: 62 FYCI-CPVTHYG--KTCEHVSDQTNCEKHLCQN 91
>AF492690-1|AAM49742.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 191 FSCVNCRGEHMATNKSCPEFSRQTNIKKHMSQN 93
F C+ C H K+C S QTN +KH+ QN
Sbjct: 62 FYCI-CPVTHYG--KTCEHVSDQTNCEKHLCQN 91
>AF492688-1|AAM49741.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 191 FSCVNCRGEHMATNKSCPEFSRQTNIKKHMSQN 93
F C+ C H K+C S QTN +KH+ QN
Sbjct: 62 FYCI-CPVTHYG--KTCEHVSDQTNCEKHLCQN 91
>AF492687-1|AAM49740.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 191 FSCVNCRGEHMATNKSCPEFSRQTNIKKHMSQN 93
F C+ C H K+C S QTN +KH+ QN
Sbjct: 62 FYCI-CPVTHYG--KTCEHVSDQTNCEKHLCQN 91
>AF492686-1|AAM49739.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 191 FSCVNCRGEHMATNKSCPEFSRQTNIKKHMSQN 93
F C+ C H K+C S QTN +KH+ QN
Sbjct: 62 FYCI-CPVTHYG--KTCEHVSDQTNCEKHLCQN 91
>AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication
licensing factor MCM2/3/5-type protein protein.
Length = 810
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -2
Query: 176 CRGEHMATNKSCPEFSRQTNIKKHMSQNLISYQEASKL 63
C H+AT +C E RQ KK + +L + +K+
Sbjct: 85 CEALHLATLDACDESERQQMFKKQLYVSLFNLDAKTKV 122
>AF049327-1|AAC38980.1| 661|Caenorhabditis elegans sperm
transmembrane protein protein.
Length = 661
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 191 FSCVNCRGEHMATNKSCPEFSRQTNIKKHMSQN 93
F C+ C H K+C S QTN +KH+ QN
Sbjct: 76 FYCI-CPVTHYG--KTCEHVSDQTNCEKHLCQN 105
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,314,429
Number of Sequences: 27780
Number of extensions: 345429
Number of successful extensions: 1107
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -