Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0997
         (662 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    22   5.2  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   5.2  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   9.0  

>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +3

Query: 363 CRYQLRTATRKRSLLPSATREPDLQPHSSDRTG 461
           C+Y  R  T+  +LL       D +P+S D  G
Sbjct: 82  CKYCNRQFTKSYNLLIHERTHTDERPYSCDICG 114


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -1

Query: 98  TFIMIY*FVFVLTLF*YPLDVKGC*VPRARHR 3
           TF +I+  VFV TL    L + GC V  +  R
Sbjct: 209 TFAIIHLSVFVYTLVSVILIIMGCDVVASNSR 240


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/18 (44%), Positives = 15/18 (83%)
 Frame = -2

Query: 574 PQLRVLPALVVQERQALR 521
           P+L+  PA++V +R++LR
Sbjct: 181 PRLQRCPAMLVFDRRSLR 198


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,979
Number of Sequences: 336
Number of extensions: 3375
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)